PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn350721 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | CAMTA | ||||||||
Protein Properties | Length: 1138aa MW: 125647 Da PI: 5.4958 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 167.9 | 1.6e-52 | 23 | 136 | 4 | 116 |
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e + rwlk+ e++ iL+++++ +lt +++ +p+sgsl+L+n++++r+frkDG++w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+np fqrr+yw+ Achn350721 23 EaQIRWLKPAEVLFILQTYKEDHLTDQPPIKPSSGSLFLFNKRVLRFFRKDGHCWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPDFQRRSYWM 121 5489*********************************************************************************************** PP CG-1 102 Leeelekivlvhyle 116 L+ + e+ivlvhy+e Achn350721 122 LDPASEHIVLVHYRE 136 *************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 77.265 | 17 | 143 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 7.8E-73 | 20 | 138 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 5.0E-47 | 23 | 136 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 1.2E-8 | 576 | 666 | IPR013783 | Immunoglobulin-like fold |
CDD | cd00102 | 7.01E-4 | 581 | 665 | No hit | No description |
Pfam | PF01833 | 1.4E-7 | 581 | 658 | IPR002909 | IPT domain |
SuperFamily | SSF81296 | 5.88E-17 | 581 | 665 | IPR014756 | Immunoglobulin E-set |
Gene3D | G3DSA:1.25.40.20 | 8.2E-15 | 778 | 873 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 15.3 | 779 | 871 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 2.49E-15 | 782 | 873 | IPR020683 | Ankyrin repeat-containing domain |
Pfam | PF12796 | 5.5E-8 | 798 | 872 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 6.56E-14 | 799 | 871 | No hit | No description |
PROSITE profile | PS50088 | 10.312 | 812 | 844 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 0.0071 | 812 | 847 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 2000 | 851 | 880 | IPR002110 | Ankyrin repeat |
SMART | SM00015 | 23 | 929 | 951 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.169 | 930 | 959 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 5.58E-5 | 977 | 1036 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 150 | 988 | 1010 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.01 | 1011 | 1033 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.212 | 1013 | 1037 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 1.0E-4 | 1014 | 1033 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1138 aa Download sequence Send to blast |
MKICITAISN PISGYNLPDI VREAQIRWLK PAEVLFILQT YKEDHLTDQP PIKPSSGSLF 60 LFNKRVLRFF RKDGHCWRKK KDGRTVGEAH ERLKVGNVEA LNCYYAHGEQ NPDFQRRSYW 120 MLDPASEHIV LVHYREISEG RHSPGSISKL SAGSPLTISQ SPSYTAQHPG SATAISELYD 180 QYQSPGSVEV SSDAVANSNG MDHLERIERK GESNGSSGLE FSQALRRLEE QLSLNDETLG 240 EIDSFCNGNE NSNDSESIIN GQSGCAPSVN DLSTLLLQRQ SGSPLTLSQS PSYTAQHPGS 300 ATAISELYDL YQSPGSVEVS SDAVANSNGM DHLERIERKG ESNGSSGLEF SQALRRLEEQ 360 LSLNDETLGE IDSFCNGNEN SNDSESIING QSGCAPSVDD LSTLLLQRQS GGNRKHNHQG 420 MAQQFTGEHK NSLPWKEMLD FSTGSPGAES EEKNVYTSSE KGTQLSYSRC DLLEEQETGH 480 WINFGTHDSR KCNDFPTPDS DANLQASPSI KYIQSSESHF TLPTSMFLSQ ELDFEFPAYS 540 PLTNTRHTDS DYFTTMFDKG QIGLHLEADS SLTIAQQQKF TIREISPDWG YASEATKVVI 600 VGSFLCDPSE GAWTCMFSDR EVPVQIIQEG VICCLAPPHL PGKVTLCITS GNQESCSEVR 660 EFDYRAQTGS CAHFSSSHKE KTKSPEELLA LVRFAQMLLS DPSVEKGDMT ESGLDQWGKF 720 KASEDLWNHV FMALLDGSWT SSSTTEWLLQ ELLKDKLQQW LSSRSQGGCD EQGCSLSKKE 780 QGVIHMVAGM DFEWALNPIL NSGVSINFRD INGWTALHWA AHFGREKMVA ALIASGASAW 840 AVTDPNSLDR TGKTPASVAA SSGHKGLAGY LSEVALTSHL SSLTLEGKEL SKGSPDAEAE 900 IDANNFLQRN IDTNEDQNSL KDTLSAVRNA AQAAARIQAA FRAHSFRRRT QKEDASAAAS 960 SANEYNILSN DIKGLSVASK LAFRNARDYN TAALSIQKKF RGWKGHKDFL AFRQKVVKIQ 1020 AHVRGHQVRK QYKVIWAVGI LEKVVLRWRR KGAGFRGFRQ EMESIDESED EDIIKVFRKQ 1080 KVEGAIDEAV SIVRSMVDSP DACQQYSRVL GRYRQAKAGL EGADSDVTST SQREMFG* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028093707.1 | 0.0 | calmodulin-binding transcription activator 4-like | ||||
Refseq | XP_028093713.1 | 0.0 | calmodulin-binding transcription activator 4-like | ||||
Swissprot | Q9FYG2 | 0.0 | CMTA4_ARATH; Calmodulin-binding transcription activator 4 | ||||
TrEMBL | A0A2R6QRE5 | 0.0 | A0A2R6QRE5_ACTCH; Calmodulin-binding transcription activator like | ||||
STRING | VIT_01s0010g03850.t01 | 0.0 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3932 | 20 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 0.0 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Publications ? help Back to Top | |||
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