PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn346641 | ||||||||
Common Name | EIL3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | EIL | ||||||||
Protein Properties | Length: 626aa MW: 70238.8 Da PI: 5.0355 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 423.4 | 2.3e-129 | 35 | 357 | 1 | 303 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 eel++rmwkdq++lkr+ker+k + a++++k +k+++qarrkkmsraQDgiLkYMlk mevcn++GfvYgiipekgkpv+g sd++raWWkekv Achn346641 35 EELERRMWKDQIKLKRIKEREKLA---ALLAAEKEKPKKITDQARRKKMSRAQDGILKYMLKLMEVCNVRGFVYGIIPEKGKPVSGTSDNIRAWWKEKV 130 8*******************9964...45568999**************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198 +fd+ngpaai+ky+ ++++ +++++ ++ s+++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww +lgl+k q+ ppykkp Achn346641 131 KFDKNGPAAIAKYEVECVAKAEGDGF--RKGSSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGSEEWWVKLGLPKGQR-PPYKKP 226 ***************99998888888..789999**********************************************************.9***** PP GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XXXXXXXXXXXXXXXXXXXX... CS EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........slrkqspkvtlsceqkedve... 285 hdlkk+wkv+vLtavikhmsp+i++i++l+ +sk+lqdkm+akes ++l vl++ee+++++ s+++ + +++k+++++++++dv+ Achn346641 227 HDLKKMWKVGVLTAVIKHMSPDIAKIKRLVQKSKCLQDKMTAKESLIWLGVLSREESLLQNSSSDNGtsgiteapsGTCGGKKKLIVDSDSDYDVDdig 325 ************************************************************9999944456776654333499**************765 PP ......XXXXXX.XXXXXXXXXX.................X CS EIN3 286 ......gkkeskikhvqavktta.................g 303 +++++ + + Achn346641 326 dcvgsvS---------SKDRRIDqlldvepssqprntkphS 357 5443331.........3333322333333334444444441 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 5.8E-124 | 35 | 282 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 9.0E-70 | 159 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.48E-60 | 163 | 284 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 626 aa Download sequence Send to blast |
MDANGLDYNS DIEVDEIRCG NIAEKDVSDE EIEAEELERR MWKDQIKLKR IKEREKLAAL 60 LAAEKEKPKK ITDQARRKKM SRAQDGILKY MLKLMEVCNV RGFVYGIIPE KGKPVSGTSD 120 NIRAWWKEKV KFDKNGPAAI AKYEVECVAK AEGDGFRKGS SQSILQDLQD ATLGSLLSSL 180 MQHCDPPQRK YPLEKGVPPP WWPTGSEEWW VKLGLPKGQR PPYKKPHDLK KMWKVGVLTA 240 VIKHMSPDIA KIKRLVQKSK CLQDKMTAKE SLIWLGVLSR EESLLQNSSS DNGTSGITEA 300 PSGTCGGKKK LIVDSDSDYD VDDIGDCVGS VSSKDRRIDQ LLDVEPSSQP RNTKPHSLRD 360 TERRGEQPRR KRPRVRSGPV DQQDTPSSSV HLHDEPGDNL LDINPTDVPS LIYTGQHEND 420 TAETMWPVEE DLQGRYQLPA FEFDQNSVFP SANEMPTQNV FVGGMPLPYP MVQNSELHHE 480 SQDSRLHNEN TDTKLFNGQI SGLHQVEGPQ SSVLPHDPNY DFYNTSLGFG SSGEGQQTQM 540 AFNEPWVRPN YEVNVPVLHR NENDIFGDMP PFPNEEDRPV ANFLGSPINS LSLNYHLGTD 600 AIGSLDTADV DSFLDDFNLM EYLGA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 6e-73 | 162 | 293 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF319043 | 0.0 | KF319043.1 Actinidia chinensis EIN3-like protein EIL3 (EIL3) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028106972.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein isoform X1 | ||||
Swissprot | O23116 | 1e-176 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A2R6PRK1 | 0.0 | A0A2R6PRK1_ACTCH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
STRING | XP_009364731.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-153 | ETHYLENE-INSENSITIVE3-like 3 |