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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Achn345181 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family |
B3 |
Protein Properties |
Length: 295aa MW: 32999.7 Da PI: 8.4584 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Achn345181 | genome | IKGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 39.1 | 1.3e-12 | 52 | 117 | 33 | 98 |
-SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 33 sktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
+ l+++d++g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++lv+++++
Achn345181 52 GLPLKVQDSKGKEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRIE-PEGKLVMGFRK 117
44599*************9989999999***9.********************987.77777777766 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MKRVAGDSEA RQRLLWSLSA AKKVSGGAIL IEMLCILTVR QAYFPAIYHP EGLPLKVQDS 60 KGKEWMFQFR FWPNNNSRMY VLEGVTPCIQ SMQLQAGDIV TFSRIEPEGK LVMGFRKATT 120 APPSNQGGEN VNACNGVYMN GEVSVKNTKP EVLSSPHQLK GHSALPDISS IDQANSSDPA 180 SIWPKNDKSG NEAKEVLRAK SSFHNKRKTS TLGSKSKRLR IENEDLIELK LTWEQAQGLL 240 RPPANRVPSI VVIDGVEFEE YEVQHFFSVM FELLKNTFRL LPSIENVVEF FDDN*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5yzy_C | 3e-41 | 17 | 121 | 26 | 126 | B3 domain-containing transcription repressor VAL1 |
5yzz_C | 3e-41 | 17 | 121 | 26 | 126 | B3 domain-containing transcription repressor VAL1 |
5z00_C | 3e-41 | 17 | 121 | 26 | 126 | B3 domain-containing transcription repressor VAL1 |
5z00_G | 3e-41 | 17 | 121 | 26 | 126 | B3 domain-containing transcription repressor VAL1 |
5z00_K | 3e-41 | 17 | 121 | 26 | 126 | B3 domain-containing transcription repressor VAL1 |
5z00_M | 3e-41 | 17 | 121 | 26 | 126 | B3 domain-containing transcription repressor VAL1 |
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