PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn338531
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 197aa    MW: 22822.2 Da    PI: 5.5967
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn338531genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.54.5e-1682134557
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                 +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l++ ++  +
  Achn338531  82 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHD 134
                 689******************************************99988665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-1578142IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.7680143IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-1282154No hitNo description
SuperFamilySSF579599.85E-1482132No hitNo description
PfamPF001708.5E-1482134IPR004827Basic-leucine zipper domain
CDDcd147021.15E-1883134No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MQPSEVAELN FLVPSYPNPY PPNFNLMQNN SPAFQFSRSS NPLYHLQITP QGTEFNPQPT  60
CFSNNSTSDE ADEQQLSLIN ERKQRRMISN RESARRSRMR KQKHLDELWS QVVWLRNENH  120
QLIDKLNHVS ESHDKVVQEN TQLKEETTEL RQMITDMQLN SPYPSLRDLD DLNCNMAYLR  180
TESSNHSDTS SSGLLP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194101RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028108973.11e-108basic leucine zipper 43-like
SwissprotQ9FMC21e-49BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2R6P9U41e-141A0A2R6P9U4_ACTCH; Basic leucine zipper like
STRINGVIT_14s0083g00700.t015e-93(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.15e-55basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]