PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn335281 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 1235aa MW: 137504 Da PI: 6.7329 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 22 | 4.5e-07 | 1052 | 1107 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpk 49 lp+G++F+P+d+el+ e+L++k+ ++ + + +++ +i++++P++Lp Achn335281 1052 LPAGVKFDPSDQELL-EHLEAKAWSDAhklhplI---DefipTLEGEdGICYTHPERLPG 1107 799************.999999888873454332...132222444435*********94 PP | |||||||
2 | NAM | 34 | 8.9e-11 | 1107 | 1149 | 87 | 128 |
NAM 87 gkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 gk++++l+ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l Achn335281 1107 GKTRPILH-NGKVKGYKKILVLYtnYGKQKKPEKTNWVMHQYHL 1149 899*****.999***********6658999************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.80.10.10 | 1.8E-38 | 25 | 201 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Pfam | PF08263 | 4.3E-10 | 25 | 64 | IPR013210 | Leucine-rich repeat-containing N-terminal, plant-type |
SuperFamily | SSF52058 | 3.74E-55 | 41 | 373 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SMART | SM00369 | 34 | 91 | 115 | IPR003591 | Leucine-rich repeat, typical subtype |
SMART | SM00369 | 82 | 139 | 162 | IPR003591 | Leucine-rich repeat, typical subtype |
Pfam | PF13855 | 2.5E-9 | 140 | 199 | IPR001611 | Leucine-rich repeat |
SMART | SM00369 | 150 | 187 | 211 | IPR003591 | Leucine-rich repeat, typical subtype |
Gene3D | G3DSA:3.80.10.10 | 2.0E-44 | 205 | 364 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SMART | SM00369 | 120 | 212 | 235 | IPR003591 | Leucine-rich repeat, typical subtype |
SMART | SM00369 | 11 | 236 | 260 | IPR003591 | Leucine-rich repeat, typical subtype |
SuperFamily | SSF52058 | 6.97E-44 | 332 | 539 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Gene3D | G3DSA:3.80.10.10 | 3.3E-37 | 365 | 538 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SMART | SM00369 | 200 | 499 | 523 | IPR003591 | Leucine-rich repeat, typical subtype |
SuperFamily | SSF56112 | 8.99E-45 | 624 | 878 | IPR011009 | Protein kinase-like domain |
PROSITE profile | PS50011 | 13.277 | 633 | 882 | IPR000719 | Protein kinase domain |
Pfam | PF00069 | 7.4E-14 | 635 | 731 | IPR000719 | Protein kinase domain |
Gene3D | G3DSA:3.30.200.20 | 1.0E-20 | 639 | 705 | No hit | No description |
PROSITE pattern | PS00107 | 0 | 639 | 662 | IPR017441 | Protein kinase, ATP binding site |
Gene3D | G3DSA:1.10.510.10 | 5.6E-7 | 706 | 751 | No hit | No description |
Gene3D | G3DSA:1.10.510.10 | 1.5E-12 | 756 | 877 | No hit | No description |
Pfam | PF07714 | 1.9E-4 | 785 | 878 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
PROSITE profile | PS51005 | 12.143 | 1006 | 1168 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.44E-24 | 1047 | 1168 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.6E-8 | 1053 | 1149 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1235 aa Download sequence Send to blast |
MKTTTMLALA LLLFLSLPQL SHQLNQEGLF LQRVKLGLSN PSGYLSDWND RDENPCGWTG 60 VNCDSMNSSV TSVDLSNASL AGPFPIFLCR LPSLSSISLY NNSLNSSLPL SISNCRNLVS 120 LNLAENLLKG PIPYTLAEIP NLTHLILQAN SFSGVIPASF ALFRRLETLN LASNLLNGTI 180 PAFLSNLTSL KWLGLAYNPF VPTRLAPEFG NLTNLETLWL SNCNIVGSIS ERFGQLSRLT 240 DLDVSNNLLS GTIPAVIFRL RSIVQIELYN NWFSGQFPSG WSNLTELRRF DASMNELTGP 300 IPNELCELPL ESLNLCDNKL VGLLPESIAL SPNLNEFKVF NNSLHGSLPS QLGKHSPLQT 360 FDVSSNNFSG EIPASLCDKG VLEQLLLIQN SFSGTIPASL GKCKTLTRVR LRDNRFSGEI 420 PVEFWSLPHV DLLDLGENSF SGPISYMISG ASNLSVLYIS KNRFSGTIPK EIGSIANLLE 480 ISASDNELSG QIPSTIVNLD QLGRLDLRNN KLSGDVPMGI GSLKQLNELN LANNGLSAPL 540 YAKAMYRDSF LGNPGLCGDI PSLCTRKDGV KNRRYLWLLR SLFILAGIVF VVGFVWFGWK 600 FLNFRKTKKG ITMLKWRSFH KLVFSEFEIL NCIDEDNVIG SGSSGKVYKA VLSNGEVVAV 660 KKLCERPKID NESFTNVSSE KDAFEVEVET LGKIRHKNIV RLWCCCNTGD CKLLVYEYMP 720 NGSLGDLLHS SKSDLLDWPT RFRIALDAAE ANRGAEPMSA ITGSCGYIAP DAVLFGLNPT 780 AEYAYTLRVN EKSDIYSFGV VILELVTGRR PIDPEFGEKD LVTWVCNSLD QKGTNHVIDP 840 NLDSAFKEQI SKVLDIGLLC VSSLPSIRPS MRRVVKLLQE CYKYGEPGHR TAECRKGQRQ 900 EKNLFMETKE ETEERNGKTD STTESKEPIN PELDELIKGD CGPLLVHTSR ALNRVINALI 960 REAWFLTLMH TKVLSFDSLC DILFADPFFS VVLDDVAAGN HSDFHAQDGF LFKGNQLYVP 1020 YSSLRLKIIR ELHDEGNVDL IQQTGIHNLP GLPAGVKFDP SDQELLEHLE AKAWSDAHKL 1080 HPLIDEFIPT LEGEDGICYT HPERLPGKTR PILHNGKVKG YKKILVLYTN YGKQKKPEKT 1140 NWVMHQYHLG NNEDERDGEL VVSKVFYQTQ PRQCGSITKE PSPKKSKGRT RHQNPRFNDH 1200 NTLVEYCNPS LISFDQRDRD RTSSRPVIPN FNIS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5ixo_A | 1e-170 | 24 | 566 | 7 | 601 | Receptor-like protein kinase 5 |
5ixq_A | 1e-170 | 24 | 566 | 7 | 601 | Receptor-like protein kinase 5 |
5ixt_A | 1e-170 | 24 | 566 | 7 | 601 | Receptor-like protein kinase 5 |
5iyv_A | 1e-170 | 24 | 566 | 7 | 601 | Receptor-like protein kinase 5 |
5iyx_A | 1e-170 | 24 | 566 | 7 | 601 | Receptor-like protein kinase 5 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028105367.1 | 0.0 | LOW QUALITY PROTEIN: receptor-like protein kinase HSL1 | ||||
Swissprot | Q9SGP2 | 0.0 | HSL1_ARATH; Receptor-like protein kinase HSL1 | ||||
TrEMBL | A0A2R6QXG3 | 0.0 | A0A2R6QXG3_ACTCH; Receptor-like protein kinase | ||||
STRING | XP_010093960.1 | 0.0 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 4e-70 | NAC domain containing protein 73 |