PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn321981

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

Dof

Protein Properties

Length: 1696aa MW: 188194 Da PI: 6.9102

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn321981	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	72.7	5.2e-23	66	112	4	50
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvP 50 ++l+cprCdst+t+f yynny+ +qPr+ C +C+r Wt+GG+lr v Achn321981 66 DHLTCPRCDSTDTRFLYYNNYNPAQPRHHCNSCHRAWTRGGTLRRVK 112 6789****************************************996 PP
2	zf-Dof	54.2	3.1e-17	385	430	3	48
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrn 48 ++ l+cprCdstntkf +y n sl qPr++C +C + Wt+GG++r Achn321981 385 QERLPCPRCDSTNTKFIFYCNKSLYQPRHYCSSCCQSWTQGGTIRS 430 68899***************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-15	61	111	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.3E-21	67	114	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	21.25	68	122	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	4.0E-13	381	429	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.2E-16	386	438	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	18.492	388	442	IPR003851	Zinc finger, Dof-type
Pfam	PF16135	4.9E-18	917	987	IPR032308	Jas TPL-binding domain
SuperFamily	SSF57903	1.62E-9	1018	1057	IPR011011	Zinc finger, FYVE/PHD-type
Gene3D	G3DSA:3.30.40.10	3.3E-10	1021	1057	IPR013083	Zinc finger, RING/FYVE/PHD-type
SMART	SM00249	4.8E-5	1027	1080	IPR001965	Zinc finger, PHD-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 1696 aa Download sequence Send to blast
MKEGLRSSAK RESGVVSEKD NADSGLNSGE EIASDGENEK RGSDGRGKRG QRVKGGGSYL 60 PEPEPDHLTC PRCDSTDTRF LYYNNYNPAQ PRHHCNSCHR AWTRGGTLRR VKCSWVRVKA 120 REIKGGYENV EQGEGGDVSA DRRIGRGQLG RRIRVNGSGK EGDKVSLCLE EGDETKKTHG 180 NEMQAQAPNS LEDRKIEGGA DKVEHVEDAD VCADEKIGRR GTRRRMVNSS DDEEDVNSGL 240 EDGDGTKNES NNEMQAQVPN SLEDRIFHGG SDNVKQGEDA DVSVDGKIRR GRPGRRRRKV 300 NGSVKEKNEV NSCPKEGDEV ENSGPNLTDP NCVEDSMPFS LESKLEGRRS GREDEHMECN 360 EEAYVNAHGD NHTDTGGKHL PGPNQERLPC PRCDSTNTKF IFYCNKSLYQ PRHYCSSCCQ 420 SWTQGGTIRS YCRPVKKRRV DSSDEVKDEV NSGLEEGDEI KKTDVNNRQG LVPNSLASSQ 480 ERKLEGERNG SEVSEHMECY EESDVITHGD NHTGKPKTGR GKKGRKRKLV EGSVCDGEDG 540 AQIKKVKEAP FGGKTQVVGR ILRSRTAVMG VGEKMVDGEP VGGVDVKKDC DSLSKKVVDM 600 EKDGIARSIG RGKKKFKGRR GRPPKVQGKS DSSCKKVVEM GKDGIAQLFD RGKKKLKGRR 660 GRPPKVQGTN GPQKVIGTKE PKKMGSRENG DQPKSKKVSR DSKFLDNGKH SRRGRHVHHR 720 GQKIIVKQSE WNKQKKGGEL VMRTSTEKQL LRDQIIAMLK NAGWTIEYRP RSGRHYLDSV 780 YVCPQGGSYW SVTLAYRMLK KQVEDGNADG RAISAFTPIP EEEFSKLFRV VSEKKKKRLL 840 EKGLKRQIRA ANEKIKGVIR KKSFIKKLGD SANAMQRGMQ RSNRDGRQNR KRLALLVRDS 900 NKGWDPDSEG FVLYDGKCSL LSWMIDLGTV LDGGKVQYMI HEKTRALLDG KITRDGIHCT 960 CCDEIFDLSD FESHAGCELS QTFQNLYLES GNSLFQCLLD SWRKHEGAEC IGFHPIDIDG 1020 DDPNDDTCNK CGDGGDLICC DSCPSTFHQN CLNIQVFERL QVLLGVKHQL EEGFSCTLVQ 1080 RFDISEDISL SSVPQKVECN SKLAIALSIM DECFLPIVDQ RSGINMMHNV VYSCGIHGNR 1140 LAEMPFIGTR HIYRRQGMCR RLLNAIETAL CSLDVEKLVI PAIAELLQTW TSVFGFMPLE 1200 ESNKKDMEYM NIIVFPGVDM LQKPLLNQKF TEENLISIPA AKSMELITKH QTTHEWASDS 1260 CMDHSAESDL KVSHEVMLDH THGTSDIAAP VESTLLLPDV SLNDACDLPS ETVKLKESVT 1320 IENFLGHSIV THDNQELENK DIKDYEASGV NALELGGQHT TKEINKEENA HSGSTNMTRD 1380 EISKLNRQSV CVLGVQHKLS FDFQTLSDAT NCKGKTLHAK DGTDVSLNAA CDLPKETMKL 1440 KESVTIENCL IHSRVTHDNQ EWKNKDIKDF EASGVDVLEL GGQHATKEMN KEENAHSRSI 1500 NVPSDEISKL NQLGVLGVEP KLSYDFQTVC NATNCEGNTL HANDDPDVSL NGTCDLPSET 1560 VKSRESVTIE NSLDHSGVTH DNPAWENKNI KDAIELCGQH TTKEINKEEN APSGSTNVIH 1620 DEVSKLNQLS ALGVEHKLSC VSQTVSDATN CGMGKARHAK EGPDCQLNGE VDTANFICQD 1680 SASTNLIHSD VQCRT*

Sequence ? help Back to Top

Protein Sequence Length: 1696 aa Download sequence Send to blast

MKEGLRSSAK RESGVVSEKD NADSGLNSGE EIASDGENEK RGSDGRGKRG QRVKGGGSYL  60
PEPEPDHLTC PRCDSTDTRF LYYNNYNPAQ PRHHCNSCHR AWTRGGTLRR VKCSWVRVKA  120
REIKGGYENV EQGEGGDVSA DRRIGRGQLG RRIRVNGSGK EGDKVSLCLE EGDETKKTHG  180
NEMQAQAPNS LEDRKIEGGA DKVEHVEDAD VCADEKIGRR GTRRRMVNSS DDEEDVNSGL  240
EDGDGTKNES NNEMQAQVPN SLEDRIFHGG SDNVKQGEDA DVSVDGKIRR GRPGRRRRKV  300
NGSVKEKNEV NSCPKEGDEV ENSGPNLTDP NCVEDSMPFS LESKLEGRRS GREDEHMECN  360
EEAYVNAHGD NHTDTGGKHL PGPNQERLPC PRCDSTNTKF IFYCNKSLYQ PRHYCSSCCQ  420
SWTQGGTIRS YCRPVKKRRV DSSDEVKDEV NSGLEEGDEI KKTDVNNRQG LVPNSLASSQ  480
ERKLEGERNG SEVSEHMECY EESDVITHGD NHTGKPKTGR GKKGRKRKLV EGSVCDGEDG  540
AQIKKVKEAP FGGKTQVVGR ILRSRTAVMG VGEKMVDGEP VGGVDVKKDC DSLSKKVVDM  600
EKDGIARSIG RGKKKFKGRR GRPPKVQGKS DSSCKKVVEM GKDGIAQLFD RGKKKLKGRR  660
GRPPKVQGTN GPQKVIGTKE PKKMGSRENG DQPKSKKVSR DSKFLDNGKH SRRGRHVHHR  720
GQKIIVKQSE WNKQKKGGEL VMRTSTEKQL LRDQIIAMLK NAGWTIEYRP RSGRHYLDSV  780
YVCPQGGSYW SVTLAYRMLK KQVEDGNADG RAISAFTPIP EEEFSKLFRV VSEKKKKRLL  840
EKGLKRQIRA ANEKIKGVIR KKSFIKKLGD SANAMQRGMQ RSNRDGRQNR KRLALLVRDS  900
NKGWDPDSEG FVLYDGKCSL LSWMIDLGTV LDGGKVQYMI HEKTRALLDG KITRDGIHCT  960
CCDEIFDLSD FESHAGCELS QTFQNLYLES GNSLFQCLLD SWRKHEGAEC IGFHPIDIDG  1020
DDPNDDTCNK CGDGGDLICC DSCPSTFHQN CLNIQVFERL QVLLGVKHQL EEGFSCTLVQ  1080
RFDISEDISL SSVPQKVECN SKLAIALSIM DECFLPIVDQ RSGINMMHNV VYSCGIHGNR  1140
LAEMPFIGTR HIYRRQGMCR RLLNAIETAL CSLDVEKLVI PAIAELLQTW TSVFGFMPLE  1200
ESNKKDMEYM NIIVFPGVDM LQKPLLNQKF TEENLISIPA AKSMELITKH QTTHEWASDS  1260
CMDHSAESDL KVSHEVMLDH THGTSDIAAP VESTLLLPDV SLNDACDLPS ETVKLKESVT  1320
IENFLGHSIV THDNQELENK DIKDYEASGV NALELGGQHT TKEINKEENA HSGSTNMTRD  1380
EISKLNRQSV CVLGVQHKLS FDFQTLSDAT NCKGKTLHAK DGTDVSLNAA CDLPKETMKL  1440
KESVTIENCL IHSRVTHDNQ EWKNKDIKDF EASGVDVLEL GGQHATKEMN KEENAHSRSI  1500
NVPSDEISKL NQLGVLGVEP KLSYDFQTVC NATNCEGNTL HANDDPDVSL NGTCDLPSET  1560
VKSRESVTIE NSLDHSGVTH DNPAWENKNI KDAIELCGQH TTKEINKEEN APSGSTNVIH  1620
DEVSKLNQLS ALGVEHKLSC VSQTVSDATN CGMGKARHAK EGPDCQLNGE VDTANFICQD  1680
SASTNLIHSD VQCRT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	521	528	KKGRKRKL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028120215.1	0.0	uncharacterized protein LOC114317647
TrEMBL	A0A2R6P650	0.0	A0A2R6P650_ACTCH; Increased DNA methylation like

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	9e-19	Dof family protein