PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn313661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 422aa MW: 46741.6 Da PI: 7.2234 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.6 | 7.9e-12 | 247 | 292 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er RR+++N++f Lr ++P+ +++Ka+ L Av YI++L Achn313661 247 NHVEAERHRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 292 799***********************6.....4***************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF14215 | 4.0E-44 | 28 | 175 | IPR025610 | Transcription factor MYC/MYB N-terminal |
SuperFamily | SSF47459 | 1.27E-17 | 242 | 306 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.59 | 243 | 292 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.66E-13 | 246 | 297 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 3.1E-16 | 247 | 306 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-9 | 247 | 292 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.1E-15 | 249 | 298 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence Send to blast |
MKFKEKIVKE NNPLTAFDGH DGHGSQPDWW AYAIFWGSSN QDDSGRLLLS WEDGHFQGAK 60 NTAPKQQHAT KHHHAALAGD ADVTDAAEWF YVMSLTRSFS TRDGIPGKAF SSGSLVWLFG 120 SNQLQFYNCE RAKEAQFHGI LTLVCVPTPI GVLELGSCDV IKENWGLVQQ VRSLFGSDSD 180 VIIPKIPKQP DSSNNISFAD FGLVTGLQEE GTTKNVESEY SKLENQQWKT PKKRGRKPGA 240 GREMVVNHVE AERHRREKLN HRFYALRAVV PNVSRMDKAS LLSDAVSYIN ELKSKVELLE 300 SQVHERQCNK KVKLELGGAT DNQSTTTSVN QTRPNNNSFG VIQPPEVEVK IVGPDAMIRV 360 QSENGNYPAA RLMDALRDLE SPVHHASMSS VNDLMLQDVV IRAPEGLTSD GLKAALLRRL 420 G* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5gnj_A | 3e-26 | 241 | 318 | 2 | 80 | Transcription factor MYC2 |
5gnj_B | 3e-26 | 241 | 318 | 2 | 80 | Transcription factor MYC2 |
5gnj_E | 3e-26 | 241 | 318 | 2 | 80 | Transcription factor MYC2 |
5gnj_F | 3e-26 | 241 | 318 | 2 | 80 | Transcription factor MYC2 |
5gnj_G | 3e-26 | 241 | 318 | 2 | 80 | Transcription factor MYC2 |
5gnj_I | 3e-26 | 241 | 318 | 2 | 80 | Transcription factor MYC2 |
5gnj_M | 3e-26 | 241 | 318 | 2 | 80 | Transcription factor MYC2 |
5gnj_N | 3e-26 | 241 | 318 | 2 | 80 | Transcription factor MYC2 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023880894.1 | 1e-170 | transcription factor MYC2-like | ||||
TrEMBL | A0A2R6QP13 | 0.0 | A0A2R6QP13_ACTCH; Transcription factor bHLH14 like | ||||
STRING | EOX95614 | 1e-167 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1072 | 21 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00870.1 | 2e-82 | bHLH family protein |