PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn302861 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | ERF | ||||||||
Protein Properties | Length: 207aa MW: 23266.1 Da PI: 5.1092 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.3 | 5.1e-15 | 21 | 69 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y GVr ++ grWv+eIr p++ ++r++lg++ ++e+Aa+a++aa +l+ge Achn302861 21 YAGVR--SRGGRWVSEIRIPKT---KTRIWLGSHHSPEKAARAYDAALYCLKGE 69 78995..779*********954...5*************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 16.937 | 14 | 76 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.8E-21 | 20 | 82 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.2E-7 | 21 | 69 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.99E-14 | 21 | 77 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 2.86E-21 | 21 | 78 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.5E-21 | 21 | 77 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MDLGPTLTLQ KGRQRRGKGP YAGVRSRGGR WVSEIRIPKT KTRIWLGSHH SPEKAARAYD 60 AALYCLKGEH GSFNFPNNRR PYLANRSVGS LPVDEIQFIA AEFSCFDDSA ATSEPFPMSP 120 LMETHLSSEP PVTPDPQNVN EMEANNVDAE PYFPAFMQEE EPHVPTFVPE EPYIPAYVRE 180 AAPILHGDLL LDEWLTLDGD WMRNFH* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00463 | DAP | Transfer from AT4G31060 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6R412 | 1e-152 | A0A2R6R412_ACTCH; Ethylene-responsive transcription factor |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18774 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31060.1 | 2e-33 | ERF family protein |