PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn276961 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 273aa MW: 30807 Da PI: 7.4507 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.9 | 1.4e-21 | 27 | 82 | 72 | 128 |
NAM 72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++rat+sgyWkatgk+++v+s +++l g+k+tLvf+kgrapkge+t+W+mhey + Achn276961 27 RVRKRATESGYWKATGKERNVKS-GSNLLGTKRTLVFHKGRAPKGERTEWIMHEYCM 82 345779*****************.99*****************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 26.996 | 1 | 98 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-10 | 27 | 81 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.66E-23 | 29 | 97 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence Send to blast |
MVAGQRVSVL ADRRRIDILL LEEEARRVRK RATESGYWKA TGKERNVKSG SNLLGTKRTL 60 VFHKGRAPKG ERTEWIMHEY CMSGMSQDSL VVCRLRKNTE FRLNDSPRQG SSSLRPLSTE 120 DSINFTLSEV AVEQLGLLEG AKAVESCLKE CSSSHNSHSV EQQIDSESES NLKLAIELSQ 180 LCSSSCQGFD DEECYAEILK DDIVDLGKTL LPPTPDLLPM VPEKTEDEKC CQQPEQAIPS 240 HVLPLQGKAN RRIRLRWLKY HHKFHFKPVE NS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028086807.1 | 1e-95 | NAC domain-containing protein 60-like | ||||
TrEMBL | A0A2R6Q7B9 | 1e-176 | A0A2R6Q7B9_ACTCH; NAC domain-containing protein | ||||
STRING | XP_010102025.1 | 1e-73 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4154 | 22 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44290.1 | 1e-41 | NAC domain containing protein 60 |