PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn273911

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

Nin-like

Protein Properties

Length: 412aa MW: 46997.5 Da PI: 7.7187

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn273911	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	39.4	1.1e-12	218	260	8	52
RWP-RK 8 edlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ed+ +y + + dAA++L ++++ Kr CR+yGI+RWP R + ++ Achn273911 218 EDILHYSKRSRCDAARNL--STSTFKRVCRKYGISRWPTRNVDKV 260 788999999999**98..6899***************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	10.546	194	281	IPR003035	RWP-RK domain
Pfam	PF02042	1.1E-9	218	260	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence Send to blast
MDIIRLVRIH SLLVGDTSLV NSILAWTSLK KRDRVVGRAL SSPNLLYCSD VTQLSMAEYP 60 LAHFARECGL RGCFAISLRS NYTGNDVYLL EIFLPANNKD KDPLTSLNKI LETIKQEFKP 120 FRLASGEELG EELYVEVIEF QNGQKHHYVQ ILHVTGSLPS LEPLQNGGEI MQMDSSDHQS 180 NDAKQCEIDV NHPQELGIKK TSGREHKNTG VRIESPYEDI LHYSKRSRCD AARNLSTSTF 240 KRVCRKYGIS RWPTRNVDKV HHTKSVTPVS YIDCFPASLR PYIWHVKDVA LDGNYDYKIM 300 CGGQQTINEL THCLSWFGGC PGMDRWMAMP NRGLLIASCY NVVLYYLSNK QCLTFLPLSH 360 AVPPIESSWT LYHYQRAQGW ETAYNRRIQH FRELVNYNIA TTDAISLDEK E*

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence Send to blast

MDIIRLVRIH SLLVGDTSLV NSILAWTSLK KRDRVVGRAL SSPNLLYCSD VTQLSMAEYP  60
LAHFARECGL RGCFAISLRS NYTGNDVYLL EIFLPANNKD KDPLTSLNKI LETIKQEFKP  120
FRLASGEELG EELYVEVIEF QNGQKHHYVQ ILHVTGSLPS LEPLQNGGEI MQMDSSDHQS  180
NDAKQCEIDV NHPQELGIKK TSGREHKNTG VRIESPYEDI LHYSKRSRCD AARNLSTSTF  240
KRVCRKYGIS RWPTRNVDKV HHTKSVTPVS YIDCFPASLR PYIWHVKDVA LDGNYDYKIM  300
CGGQQTINEL THCLSWFGGC PGMDRWMAMP NRGLLIASCY NVVLYYLSNK QCLTFLPLSH  360
AVPPIESSWT LYHYQRAQGW ETAYNRRIQH FRELVNYNIA TTDAISLDEK E*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028113989.1	6e-71	protein NLP7-like
TrEMBL	A0A2R6QMR7	1e-126	A0A2R6QMR7_ACTCH; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	2e-27	Nin-like family protein