PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn251821 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bZIP | ||||||||
Protein Properties | Length: 254aa MW: 28415.7 Da PI: 6.3648 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.3 | 4.4e-10 | 77 | 120 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 ++ rr+++NReAAr+sR+RKka++++Le +L++ ++L+ Achn251821 77 QALRRLAQNREAARKSRLRKKAYVQQLEHSRMKLTQLEQELQRA 120 6789************************9888888887766432 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.3E-9 | 69 | 132 | No hit | No description |
SMART | SM00338 | 8.5E-6 | 71 | 138 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.829 | 75 | 124 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.0E-8 | 78 | 122 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.06E-7 | 79 | 124 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 80 | 95 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MPLKRGYDSA RNQTRFADIG ELEQPAVGFH QDDAVDLSRS GSSGNNGNFE NWGDSGMGEH 60 SQQTDTSTDV DTDDRNQALR RLAQNREAAR KSRLRKKAYV QQLEHSRMKL TQLEQELQRA 120 RQQILENQLE PLTDQQLMGI CNLQQSSQQA EDALSQGMEA LQQSLVETLS SNCLGPTGSG 180 NVADYMGQMA IAMGKLATLE NFLHQADLLR QQTLQQMHRI LTTRQAARAL LVISDYMTRL 240 RALSSLWLAR PKD* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028084521.1 | 2e-80 | transcription factor TGA2.3-like isoform X3 | ||||
Refseq | XP_028102203.1 | 2e-80 | transcription factor TGA2.3-like | ||||
Swissprot | Q41558 | 7e-64 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | A0A3Q8TD58 | 0.0 | A0A3Q8TD58_ACTDE; Basic leucine zipper protein 1 | ||||
STRING | VIT_01s0011g03230.t01 | 5e-79 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16459 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 2e-51 | bZIP family protein |