PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn251051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | WRKY | ||||||||
Protein Properties | Length: 215aa MW: 24135.2 Da PI: 6.0812 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.8 | 3.2e-11 | 72 | 117 | 17 | 59 |
T-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 17 gsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 g + rsYYrCt++ C+++k+v++ +edp + ++tY g+H+++ Achn251051 72 GCRKRRSYYRCTHKhdqCCKATKQVQTIQEDPPMYQTTYFGHHTCK 117 66778********9887799************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 11.336 | 51 | 114 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.5E-10 | 71 | 118 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.5E-12 | 72 | 117 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.0E-10 | 72 | 118 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.11E-11 | 72 | 118 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence Send to blast |
MEKLVMGRDW AAQLQILLRK PTGLDGPGTA DELAVKILRS FTETLSALNS GDVDQIDSGE 60 SRQTQATTAR RGCRKRRSYY RCTHKHDQCC KATKQVQTIQ EDPPMYQTTY FGHHTCKHHT 120 LVASQANSDS HPLQGSHNNL LSFESKSPIS SPKLEKPYKE EAQESIVWPD MMPLDVTYGV 180 CSSKLTSFCG LDMDFLVESV DLESCFCFDE MEFL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028052697.1 | 4e-44 | WRKY DNA-binding transcription factor 70-like | ||||
Refseq | XP_028083248.1 | 4e-44 | WRKY DNA-binding transcription factor 70-like | ||||
TrEMBL | A0A2R6RWK6 | 1e-149 | A0A2R6RWK6_ACTCH; WRKY transcription factor 70 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 8e-10 | WRKY DNA-binding protein 70 |