PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn244831
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 325aa    MW: 36624.4 Da    PI: 5.3263
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn244831genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.31.8e-24231482128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlskk 96 
                 p Gf F+P+d+el+ + L kkv+g++l+++e  i+e d++ k ePw++    +++ek  yfF+k +kk +   g++  r++ +g+Wk +  + ++++++
  Achn244831  23 PYGFTFSPEDHELI-YILYKKVNGNSLPVDEGlIEERDLFgKEEPWEFF--GRGTEKTRYFFVKLKKKGKsaDGSNFVRTVGKGTWKGQDGQIPIKDQQ 118
                 89************.99*********99987779***9883569****6..33466788***9988876633689999********************* PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 g+++g kk Lv+  g+ p+  + +W+m+ey+l
  Achn244831 119 GRTIGFKKNLVYK-GKGPN-INGRWLMKEYHL 148
                 ***********96.99999.79*********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-2716170IPR003441NAC domain
PROSITE profilePS5100528.74322170IPR003441NAC domain
PfamPF023652.7E-1523148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MALPVPSVPS LVQASHQMAL SVPYGFTFSP EDHELIYILY KKVNGNSLPV DEGLIEERDL  60
FGKEEPWEFF GRGTEKTRYF FVKLKKKGKS ADGSNFVRTV GKGTWKGQDG QIPIKDQQGR  120
TIGFKKNLVY KGKGPNINGR WLMKEYHLHG VSLQPPPKLN DYVLCRIRKK DDGKKQNVPF  180
DMEAHSRCQR IGGNQDGEGV NSVSCAENSI IGRKRPRIEY MMDYELPNLS VADAAIMVES  240
NDKERDQRMD HLGAENCIPA SSEGISKCFT QDDDAEFFRG LNPIFEKFSD EGFGGMLWTE  300
SEAEQMGDPQ ESLQDLEINC EMFC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-172017213170Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18389LKKKGKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PW300.0A0A2R6PW30_ACTCH; NAC domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13708311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.12e-18NAC domain containing protein 57