PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn244831 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 325aa MW: 36624.4 Da PI: 5.3263 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 78.3 | 1.8e-24 | 23 | 148 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlskk 96 p Gf F+P+d+el+ + L kkv+g++l+++e i+e d++ k ePw++ +++ek yfF+k +kk + g++ r++ +g+Wk + + ++++++ Achn244831 23 PYGFTFSPEDHELI-YILYKKVNGNSLPVDEGlIEERDLFgKEEPWEFF--GRGTEKTRYFFVKLKKKGKsaDGSNFVRTVGKGTWKGQDGQIPIKDQQ 118 89************.99*********99987779***9883569****6..33466788***9988876633689999********************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 g+++g kk Lv+ g+ p+ + +W+m+ey+l Achn244831 119 GRTIGFKKNLVYK-GKGPN-INGRWLMKEYHL 148 ***********96.99999.79*********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.48E-27 | 16 | 170 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 28.743 | 22 | 170 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.7E-15 | 23 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MALPVPSVPS LVQASHQMAL SVPYGFTFSP EDHELIYILY KKVNGNSLPV DEGLIEERDL 60 FGKEEPWEFF GRGTEKTRYF FVKLKKKGKS ADGSNFVRTV GKGTWKGQDG QIPIKDQQGR 120 TIGFKKNLVY KGKGPNINGR WLMKEYHLHG VSLQPPPKLN DYVLCRIRKK DDGKKQNVPF 180 DMEAHSRCQR IGGNQDGEGV NSVSCAENSI IGRKRPRIEY MMDYELPNLS VADAAIMVES 240 NDKERDQRMD HLGAENCIPA SSEGISKCFT QDDDAEFFRG LNPIFEKFSD EGFGGMLWTE 300 SEAEQMGDPQ ESLQDLEINC EMFC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-17 | 20 | 172 | 13 | 170 | Stress-induced transcription factor NAC1 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 83 | 89 | LKKKGKS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6PW30 | 0.0 | A0A2R6PW30_ACTCH; NAC domain-containing protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13708 | 3 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 2e-18 | NAC domain containing protein 57 |