PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn234861 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 368aa MW: 41198.5 Da PI: 5.9969 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.9 | 1.4e-51 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 + pGfrFhPtdeelv +yLkkk+++++l++ e ik+vdiyk++PwdLpk + ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ + + Achn234861 14 MLPGFRFHPTDEELVGFYLKKKIQQRSLPI-ELIKQVDIYKYDPWDLPKLAPTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSdGPR 111 579***************************.89***************9888999***************************************95556 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfy+gra kg ktdW+mhe+rl Achn234861 112 CIGLKKSLVFYRGRAAKGFKTDWMMHEFRL 141 7***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.22E-57 | 14 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.47 | 14 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-25 | 16 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence Send to blast |
MDEKSDADKI DDIMLPGFRF HPTDEELVGF YLKKKIQQRS LPIELIKQVD IYKYDPWDLP 60 KLAPTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGP RCIGLKKSLV 120 FYRGRAAKGF KTDWMMHEFR LPSISDSSAP KKFLDKNLPA NEAWAICRIF KKTNSMAQRA 180 LSHSWASPIP ETTSFDIFNI GAQPTHFSSE TLSCTTETAS FSALDIPSYK PMNPAACKPS 240 PFSIPNEDLS TGFMFSPAEM PGPTPKNTLD VTSVLFNISP ALIEDISKAS ENIDFGEPQP 300 PFHVFSLSSP QDMQGSSGAA RDSDEWGNIR SIGFPFSLSS DLADVWKPNL PWDSPPCPSE 360 MSTTYHE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-52 | 16 | 175 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-52 | 16 | 175 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-52 | 16 | 175 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-52 | 16 | 175 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-52 | 16 | 175 | 22 | 171 | NAC domain-containing protein 19 |
3swm_B | 3e-52 | 16 | 175 | 22 | 171 | NAC domain-containing protein 19 |
3swm_C | 3e-52 | 16 | 175 | 22 | 171 | NAC domain-containing protein 19 |
3swm_D | 3e-52 | 16 | 175 | 22 | 171 | NAC domain-containing protein 19 |
3swp_A | 3e-52 | 16 | 175 | 22 | 171 | NAC domain-containing protein 19 |
3swp_B | 3e-52 | 16 | 175 | 22 | 171 | NAC domain-containing protein 19 |
3swp_C | 3e-52 | 16 | 175 | 22 | 171 | NAC domain-containing protein 19 |
3swp_D | 3e-52 | 16 | 175 | 22 | 171 | NAC domain-containing protein 19 |
4dul_A | 2e-52 | 16 | 175 | 19 | 168 | NAC domain-containing protein 19 |
4dul_B | 2e-52 | 16 | 175 | 19 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00537 | DAP | Transfer from AT5G39820 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028058869.1 | 0.0 | protein FEZ-like | ||||
Refseq | XP_028080503.1 | 0.0 | protein FEZ-like | ||||
Swissprot | Q9FIW5 | 1e-102 | NAC94_ARATH; Putative NAC domain-containing protein 94 | ||||
TrEMBL | A0A2R6P9H4 | 0.0 | A0A2R6P9H4_ACTCH; Protein FEZ like | ||||
STRING | EOY03443 | 0.0 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2202 | 22 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 1e-104 | NAC domain containing protein 94 |