PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn233841

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bHLH

Protein Properties

Length: 108aa MW: 12495.9 Da PI: 4.7297

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn233841	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.6	3.4e-06	77	103	2	28
HHHHHHHHHHHHHHHHHHHHHHHCTSC CS HLH 2 rrahnerErrRRdriNsafeeLrellP 28 + h e Er+RR++ + f+ Lr llP Achn233841 77 KIVHRELERQRRKQQATLFASLRWLLP 103 678***********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	7.41E-5	74	104	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 108 aa Download sequence Send to blast
MFPLGHSDDL WSQMFTNLLQ DQTNQQDQIM GEIAFESQDL TNNMAQTQNQ NQNQNQNIVD 60 TTACSDHPIA NDPVNKKIVH RELERQRRKQ QATLFASLRW LLPIEFI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25400.1	4e-09	bHLH family protein