PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn227371 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 670aa MW: 75535.4 Da PI: 9.6084 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.6 | 4.4e-08 | 133 | 175 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ r RR+ri +++ L++l+P +K++ a++L +A++Y+k L Achn227371 133 IAARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 175 56799*****************87.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.478 | 126 | 175 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.9E-12 | 128 | 183 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.96E-13 | 130 | 184 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.2E-13 | 132 | 181 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.0E-5 | 134 | 175 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.04E-5 | 149 | 180 | No hit | No description |
CDD | cd00519 | 6.60E-35 | 372 | 574 | No hit | No description |
Gene3D | G3DSA:3.40.50.1820 | 1.5E-33 | 375 | 570 | IPR029058 | Alpha/Beta hydrolase fold |
SuperFamily | SSF53474 | 4.68E-27 | 383 | 573 | IPR029058 | Alpha/Beta hydrolase fold |
Pfam | PF01764 | 2.8E-30 | 436 | 572 | IPR002921 | Fungal lipase-like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006629 | Biological Process | lipid metabolic process | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 670 aa Download sequence Send to blast |
MIMMMQMDKF PDFCGPYSDV GDPIPPEFGN SNTCSGSSNY NNGNICTMPQ VMDTPNASSP 60 TFMNFPGGAA AGRWRGCGGG DFSGQGFSKR NSMVAMREMI FRIAAMQPIH IDPEAVKLPK 120 RRNVKISKDP QSIAARHRRE RISERIRILQ RLVPGGTKMD TASMLDEAIH YVKFLKTQVQ 180 SLELAAANRP AVTGIGFPVA VASGGLPSQM NKREKVKNIT QHLGLDLRDE ARLPMACKED 240 FCKDYLVLNP EHASLLDLVR ILFLSDLGER RFVESSEVNN LGGLRRRWLI FISVLLQKVL 300 IYLRKPMAWM GYVLEMWLNL LASNGGFGLL LLNFLKGSMV KPDKSLATFT SVVGNLDKRL 360 ELDKSINNGD SRYGASLSIM ASTLSYENEA FVQNVVTDHW KMEFLGLFNF WNDYQEQLST 420 QAIMFKDTTS NPNLIVVAFR GTEPFNTDQW RTDVDFSWYE LQGVGRIHGG FMKALGLQKK 480 TGWPKEIAQG LGREYAYYTI RQKLRDELNK NKKAKFILTG HSLGGALAIL FVAVLGLHEE 540 AWLLKRLDGV YTFGQPRVGD KKFGEFMKEK LRVFGAMWEE PNKNYFSLLW AIPKNLNAVW 600 ELIRSFIIPC TEGPDYKEGW FLRLMRVFGL AIPGLSAHFP PDYINATRLG SLPSQILVQD 660 LTQQCRKHD* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028102981.1 | 0.0 | uncharacterized protein LOC114302183 | ||||
TrEMBL | A0A2R6Q041 | 0.0 | A0A2R6Q041_ACTCH; Lipase | ||||
STRING | VIT_18s0001g10410.t01 | 0.0 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA752 | 23 | 101 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67060.1 | 3e-41 | bHLH family protein |