PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn221861 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 329aa MW: 36669.3 Da PI: 6.3184 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45 | 2e-14 | 148 | 194 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L Achn221861 148 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 194 79*************************9.....8****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 16.907 | 145 | 194 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.7E-12 | 148 | 194 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.4E-15 | 149 | 203 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.23E-14 | 149 | 200 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.3E-13 | 151 | 200 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.15E-5 | 158 | 197 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 1.9E-4 | 231 | 284 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence Send to blast |
MMCGKKEEEQ GDCSQTIIHN IQNYQEQLFL QQMQQQQHQQ QQQQQQQQNM ASLSPILPWS 60 HSFNPAHFAA SPAREPDPFF LPPPTASPYG GLFNRRAPSL QFAYDGLTIS DALGQVVQPG 120 SAPFGLQAEL SKMTGQEIMD AKALAASKSH SEAERRRRER INNHLAKLRS LLPSTTKTDK 180 ASLLAEVIQH VKELKRQTSL IADTSPVPTE SDELTVDASD DENGKFVIRA SLCCEDRSDL 240 LPDLIKTLKA LRLKTLKAEI TTLGGRVRNV LFITGEEEEE QQQQQQYCIS SIQEALKAVM 300 EKTNGDESSS GSVKRQRTNM SVLEHRSL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 153 | 158 | ERRRRE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017606084.1 | 1e-166 | PREDICTED: transcription factor bHLH30-like | ||||
Swissprot | Q9S7Y1 | 1e-110 | BH030_ARATH; Transcription factor bHLH30 | ||||
TrEMBL | A0A2R6P3T4 | 0.0 | A0A2R6P3T4_ACTCH; Transcription factor bHLH30 like | ||||
STRING | Gorai.008G186700.1 | 1e-162 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4083 | 24 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 1e-88 | bHLH family protein |
Publications ? help Back to Top | |||
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