PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn212761 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | MYB_related | ||||||||
Protein Properties | Length: 259aa MW: 29084.2 Da PI: 7.0955 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45 | 2.6e-14 | 14 | 62 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT..TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg..kgRtlkqcksrwqk 46 +g+W++eEd +l+d ++++G+g +W + +++ gRt++++k++w++ Achn212761 14 KGPWSPEEDSKLKDFIEKHGTGgNWIALPKKAAqlSGRTDNDIKNYWNT 62 79*********************88888888888889**********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 8.9E-20 | 5 | 68 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.25E-12 | 8 | 68 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 18.058 | 9 | 68 | IPR017930 | Myb domain |
SMART | SM00717 | 4.4E-12 | 13 | 66 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 9.4E-13 | 14 | 62 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 6.89E-11 | 16 | 64 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MGRAPCCDKA NVKKGPWSPE EDSKLKDFIE KHGTGGNWIA LPKKAAQLSG RTDNDIKNYW 60 NTKLKKKVLA MSNYNNNPIL LNHKKNITPH DQPNTSLLQQ TPRPQFQSYF NPITSLLPNF 120 PITNGYNNYS FTPSLLQPFM FDQASSSSDG SCSHGKEIKK EENMGLQSCF SNGYNEENQK 180 FMLDFGNYNG GETLVSGNGY FGNFSPLECG VEEVKKLIGN SGATSDHHDN VNNSFFFYND 240 DENKTQERGL YYNTASYY* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021611134.1 | 6e-51 | transcription factor RAX2-like | ||||
TrEMBL | A0A2R6P7I4 | 1e-173 | A0A2R6P7I4_ACTCH; Transcription factor like | ||||
STRING | cassava4.1_030463m | 2e-50 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 7e-33 | MYB family protein |