PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn211251 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | FAR1 | ||||||||
Protein Properties | Length: 222aa MW: 25768.8 Da PI: 4.8062 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 36.3 | 1.8e-11 | 155 | 202 | 2 | 50 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktek 50 fYn+Y+k+ GF vrk +ksk++g +++ +f C keg+ree+ kk + Achn211251 155 FYNRYSKTKGFGVRKGGVRKSKKDGCVIDCRFFCFKEGFREERYKK-NA 202 9******************************************998.33 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 5.9E-9 | 155 | 201 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MTAGGLQSTV MTIDWASGFQ STTMATRWVQ SKRRRLDPSI DSSPTHPLIV RFESCSDESA 60 PVIVMTMTPR ELFSDTRLLL FRNSKSYDVW EYFDTEIYDE EEHIDELHGH EEHAGDDTED 120 RLEDLNMENK EIDVNNVEKP YVGMKFESND DAYVFYNRYS KTKGFGVRKG GVRKSKKDGC 180 VIDCRFFCFK EGFREERYKK NAAIKKGIAE RLELDVEQEY M* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 31 | 35 | KRRRL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |