PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn207091 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 328aa MW: 36620.5 Da PI: 9.0206 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.9 | 8.9e-09 | 9 | 75 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC.....................TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkas..................kapskKlsKaeiLekAveYIksL 54 rE+ RRdr+N+ f eL l + ++ +K++Ka+iL+ +++ +k+L Achn207091 9 ADREKLRRDRLNEQFLELGNALVLLGlvkssgshfqkiallnstDPDRPKNDKATILTDTIQVLKDL 75 679****************999996668***************8888899**************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.064 | 3 | 75 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 9.03E-11 | 4 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.7E-10 | 4 | 96 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.97E-5 | 4 | 79 | No hit | No description |
Pfam | PF00010 | 2.4E-6 | 8 | 75 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.6E-7 | 9 | 81 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
MAARKFQKAD REKLRRDRLN EQFLELGNAL VLLGLVKSSG SHFQKIALLN STDPDRPKND 60 KATILTDTIQ VLKDLTAEVN RLKAECTSLS EESREVATCL WLMLKVLKPF ICLAHYSVLF 120 SKQLTQEKNE LREEKASLKS DIDNLNLQYQ QRVRAVFPWA AIDPSVVMTT TPYSYPVPLI 180 SPIPMHPTLQ PFPFFGNHNP GAIHNPCSTY IPYPAPASHQ SDQQSHQCAS TSRIPSKPDP 240 KNKKLDRCMG SNGDKCDESN DVVTDLELKM PGSTAQQELS QGKRKGKKTQ RKEKSFVDGS 300 SLSRHSSSPD FQDSSNSTQN HEVSPKS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021274838.1 | 1e-117 | transcription factor bHLH121 isoform X3 | ||||
TrEMBL | A0A2R6Q249 | 0.0 | A0A2R6Q249_ACTCH; Transcription factor bHLH121 like | ||||
STRING | EOX90849 | 1e-112 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5456 | 24 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 2e-64 | bHLH family protein |