PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn207091
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 328aa    MW: 36620.5 Da    PI: 9.0206
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn207091genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.9e-09975654
                HHHHHHHHHHHHHHHHHHHCTSCCC.....................TTS-STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkas..................kapskKlsKaeiLekAveYIksL 54
                  rE+ RRdr+N+ f eL   l  +                    ++ +K++Ka+iL+ +++ +k+L
  Achn207091  9 ADREKLRRDRLNEQFLELGNALVLLGlvkssgshfqkiallnstDPDRPKNDKATILTDTIQVLKDL 75
                679****************999996668***************8888899**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.064375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.03E-11493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-10496IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.97E-5479No hitNo description
PfamPF000102.4E-6875IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-7981IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MAARKFQKAD REKLRRDRLN EQFLELGNAL VLLGLVKSSG SHFQKIALLN STDPDRPKND  60
KATILTDTIQ VLKDLTAEVN RLKAECTSLS EESREVATCL WLMLKVLKPF ICLAHYSVLF  120
SKQLTQEKNE LREEKASLKS DIDNLNLQYQ QRVRAVFPWA AIDPSVVMTT TPYSYPVPLI  180
SPIPMHPTLQ PFPFFGNHNP GAIHNPCSTY IPYPAPASHQ SDQQSHQCAS TSRIPSKPDP  240
KNKKLDRCMG SNGDKCDESN DVVTDLELKM PGSTAQQELS QGKRKGKKTQ RKEKSFVDGS  300
SLSRHSSSPD FQDSSNSTQN HEVSPKS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021274838.11e-117transcription factor bHLH121 isoform X3
TrEMBLA0A2R6Q2490.0A0A2R6Q249_ACTCH; Transcription factor bHLH121 like
STRINGEOX908491e-112(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54562434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-64bHLH family protein