PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn197411 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 443aa MW: 49232.1 Da PI: 5.2363 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 48.1 | 3.8e-15 | 58 | 113 | 72 | 128 |
NAM 72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +n+ ++g+W a g+ e++ +++ +g ++tL fy+gr p+ ++t+Wvm+eyr+ Achn197411 58 SDHNKNSEHGFWTARGEASEIFM-NSAIIGWRTTLEFYEGRGPHRQRTNWVMQEYRI 113 566788899**************.999****************************97 PP | |||||||
2 | NAM | 45.2 | 2.9e-14 | 150 | 204 | 73 | 128 |
NAM 73 rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +n+ ++g+W a g+ e++ +++ +g ++tL fy+gr p+ + t+Wvm+eyr+ Achn197411 150 DHNKNSEHGFWTARGEASEIFM-NSAIIGWRTTLEFYEGRGPHRQITNWVMQEYRI 204 56778899**************.999****************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.8E-17 | 12 | 119 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-8 | 14 | 113 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 15.888 | 90 | 229 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.2E-7 | 133 | 204 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.57E-17 | 149 | 229 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 443 aa Download sequence Send to blast |
MAPRPRDSIG LYWTDEEIIM SLEGMEKGSP IPVNASVNGD EAYKVVVYAA DIWYLLRSDH 60 NKNSEHGFWT ARGEASEIFM NSAIIGWRTT LEFYEGRGPH RQRTNWVMQE YRITRKGLCS 120 YSNPKASVNG DEAYKVVVYA ADIWYLLRSD HNKNSEHGFW TARGEASEIF MNSAIIGWRT 180 TLEFYEGRGP HRQITNWVMQ EYRITRKGLC SYSNPKMQES SFLCRVFLSS GASPNPEMKL 240 NVGSCAGSND IHSKPSVVPE SGRTSGQGCM SESQARNRDD NTGPLAVPGR LPIIPLEDMD 300 DDDCISRGDY LELADLDGES PSSSSDNSSC VTPTADEFFD SLALLRDLGS KISQDEKGKD 360 ANVKLSVAAS IKPNEVVMRP ANLGSLVKND GRKSPAEAID KNFLDKKIFS SGSEQFIFMQ 420 VGFCSSTSPF TRGELNLRYL FG* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028085347.1 | 1e-90 | NAC domain-containing protein 7-like isoform X2 | ||||
TrEMBL | A0A2R6RMZ7 | 0.0 | A0A2R6RMZ7_ACTCH; NAC domain-containing protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11207 | 21 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 4e-15 | NAC domain containing protein 100 |