PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn197411
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 443aa    MW: 49232.1 Da    PI: 5.2363
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn197411genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.13.8e-155811372128
         NAM  72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + +n+  ++g+W a g+  e++  +++ +g ++tL fy+gr p+ ++t+Wvm+eyr+
  Achn197411  58 SDHNKNSEHGFWTARGEASEIFM-NSAIIGWRTTLEFYEGRGPHRQRTNWVMQEYRI 113
                 566788899**************.999****************************97 PP
2NAM45.22.9e-1415020473128
         NAM  73 rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +n+  ++g+W a g+  e++  +++ +g ++tL fy+gr p+ + t+Wvm+eyr+
  Achn197411 150 DHNKNSEHGFWTARGEASEIFM-NSAIIGWRTTLEFYEGRGPHRQITNWVMQEYRI 204
                 56778899**************.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.8E-1712119IPR003441NAC domain
PfamPF023651.6E-814113IPR003441NAC domain
PROSITE profilePS5100515.88890229IPR003441NAC domain
PfamPF023653.2E-7133204IPR003441NAC domain
SuperFamilySSF1019411.57E-17149229IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MAPRPRDSIG LYWTDEEIIM SLEGMEKGSP IPVNASVNGD EAYKVVVYAA DIWYLLRSDH  60
NKNSEHGFWT ARGEASEIFM NSAIIGWRTT LEFYEGRGPH RQRTNWVMQE YRITRKGLCS  120
YSNPKASVNG DEAYKVVVYA ADIWYLLRSD HNKNSEHGFW TARGEASEIF MNSAIIGWRT  180
TLEFYEGRGP HRQITNWVMQ EYRITRKGLC SYSNPKMQES SFLCRVFLSS GASPNPEMKL  240
NVGSCAGSND IHSKPSVVPE SGRTSGQGCM SESQARNRDD NTGPLAVPGR LPIIPLEDMD  300
DDDCISRGDY LELADLDGES PSSSSDNSSC VTPTADEFFD SLALLRDLGS KISQDEKGKD  360
ANVKLSVAAS IKPNEVVMRP ANLGSLVKND GRKSPAEAID KNFLDKKIFS SGSEQFIFMQ  420
VGFCSSTSPF TRGELNLRYL FG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028085347.11e-90NAC domain-containing protein 7-like isoform X2
TrEMBLA0A2R6RMZ70.0A0A2R6RMZ7_ACTCH; NAC domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112072123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.14e-15NAC domain containing protein 100