PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn193891 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | C2H2 | ||||||||
Protein Properties | Length: 269aa MW: 29600 Da PI: 8.0233 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.4 | 5.2e-05 | 61 | 80 | 3 | 22 |
ETTTTEEESSHHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHirt 22 C +C+k+F + L+rH + Achn193891 61 CRICDKVFVDAQALVRHFQA 80 *****************877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50157 | 9.182 | 59 | 87 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.0094 | 59 | 82 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 61 | 82 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence Send to blast |
MIAPVNSTEH KPIITSQKAQ LIAPDGLSVS SISINPSLEF TMSSNNMNLL KNEIQVPNLA 60 CRICDKVFVD AQALVRHFQA CHMVDNKIVH GVMNPIPYTN FASAQHSSVE QNPKSNTTQF 120 VVSAPSQVPS FHPTRNINPK IFPYLPSSSH EIPSPALPEP KPTLSLPLVH TPIMGGHGFW 180 PSLTLSPPPL PPPPPLPFIM RSLAFGLPTS YGQEAYRVLD MRRSSDCTKL LINQLDKPIR 240 EVMEAERSNN DNDGNRFDSN KLDLTLKL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6PKK6 | 1e-165 | A0A2R6PKK6_ACTCH; Formin-like protein |