PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn193891
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family C2H2
Protein Properties Length: 269aa    MW: 29600 Da    PI: 8.0233
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn193891genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.2e-056180322
                ETTTTEEESSHHHHHHHHHH CS
     zf-C2H2  3 CpdCgksFsrksnLkrHirt 22
                C +C+k+F +   L+rH + 
  Achn193891 61 CRICDKVFVDAQALVRHFQA 80
                *****************877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.1825987IPR007087Zinc finger, C2H2
SMARTSM003550.00945982IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002806182IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MIAPVNSTEH KPIITSQKAQ LIAPDGLSVS SISINPSLEF TMSSNNMNLL KNEIQVPNLA  60
CRICDKVFVD AQALVRHFQA CHMVDNKIVH GVMNPIPYTN FASAQHSSVE QNPKSNTTQF  120
VVSAPSQVPS FHPTRNINPK IFPYLPSSSH EIPSPALPEP KPTLSLPLVH TPIMGGHGFW  180
PSLTLSPPPL PPPPPLPFIM RSLAFGLPTS YGQEAYRVLD MRRSSDCTKL LINQLDKPIR  240
EVMEAERSNN DNDGNRFDSN KLDLTLKL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PKK61e-165A0A2R6PKK6_ACTCH; Formin-like protein