PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn185681
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 323aa    MW: 35505.8 Da    PI: 6.1121
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn185681genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.4e-175199355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  Achn185681 51 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 99
                56******.**********965...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.37650107IPR001471AP2/ERF domain
SMARTSM003802.8E-3250113IPR001471AP2/ERF domain
CDDcd000182.49E-2850106No hitNo description
PRINTSPR003672.1E-75162IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-2751107IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-2051108IPR016177DNA-binding domain
PfamPF008479.2E-115399IPR001471AP2/ERF domain
PRINTSPR003672.1E-77389IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MSTSSKNHQK PSQPYDPTPV HTGFSILQRN TSPPQPRERR GRGKQVEPGR FLGVRRRPWG  60
RYAAEIRDPT TKERHWLGTF DTAHEAALAY DRAALSMKGK QTRTNFVYSH QHNNALTPFD  120
LQTLIQPSHQ SHEQFFITIN QKRPCQPDTT CQAGTHIVNH SDNDSSSQSS YGSSPNDSNN  180
FFSGENNSGY LGCIVPDSCL NPNTPKSSKD GNFSSYASGQ THFDDLGMAG MGYDSNPSDD  240
LPCFDGLSYG FWGCDQTWEL NSCEFPAMSD NINPLGVDNG CMENLYPNSG NPMPTVTTSS  300
SATCSSLIPP FGDGVEFGYT LF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-2041113576Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002276452.11e-101PREDICTED: ethylene-responsive transcription factor ERF086
TrEMBLA0A2R6RVA20.0A0A2R6RVA2_ACTCH; Ethylene-responsive transcription factor
STRINGEOY064474e-95(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA93072125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-45ERF family protein