PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn174051

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bHLH

Protein Properties

Length: 348aa MW: 38488 Da PI: 4.8102

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn174051	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.7	0.00011	235	280	12	55
HHHHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkas..kapskKlsKaeiLekAveYIksLq 55 RR++i++++ L++l+P + ++ + Ka +L + ++Y+ sLq Achn174051 235 RREKIRERMKFLQDLVPGCNklLGNFQITGKAVMLDEIINYVLSLQ 280 9***************7778888899***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.906	223	279	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.14E-10	234	298	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.76E-5	235	284	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.4E-9	236	289	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence Send to blast
MDNGGDGELG CENRGCGGLL DCSYLGNFVP LPLDEVLGVN SSVSGNWTPI DALEYNTEFV 60 TSSISCHGLI DNSYVDIQKS QAELEPNMAC FGSGTFSEMD RFFIEHRSRL IVNFGCSADY 120 HLEGSGNKNE KALLPQSSTH NYAQSQEDCK LLDDGTTKFS PDRKKKRKVC DDRSQFARLK 180 NMKIEKDQCT GEQYEEKTKP EHKPVPKTCS QNVGKEVNDS STSGDAPKED YVHVRREKIR 240 ERMKFLQDLV PGCNKLLGNF QITGKAVMLD EIINYVLSLQ RQVEFLSMKL SIGYPETNVE 300 PEQILSRDIH YSQGGGAAIL GDPGTSSYPN ELLQGAANIE SPVPNVY*

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence Send to blast

MDNGGDGELG CENRGCGGLL DCSYLGNFVP LPLDEVLGVN SSVSGNWTPI DALEYNTEFV  60
TSSISCHGLI DNSYVDIQKS QAELEPNMAC FGSGTFSEMD RFFIEHRSRL IVNFGCSADY  120
HLEGSGNKNE KALLPQSSTH NYAQSQEDCK LLDDGTTKFS PDRKKKRKVC DDRSQFARLK  180
NMKIEKDQCT GEQYEEKTKP EHKPVPKTCS QNVGKEVNDS STSGDAPKED YVHVRREKIR  240
ERMKFLQDLV PGCNKLLGNF QITGKAVMLD EIINYVLSLQ RQVEFLSMKL SIGYPETNVE  300
PEQILSRDIH YSQGGGAAIL GDPGTSSYPN ELLQGAANIE SPVPNVY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	168	KKKRKV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028053571.1	1e-127	transcription factor bHLH74-like isoform X2
TrEMBL	A0A2R6R5E4	0.0	A0A2R6R5E4_ACTCH; Transcription factor bHLH74 like
STRING	VIT_07s0151g00450.t01	8e-81	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	5e-32	bHLH family protein