PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn171621
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family EIL
Protein Properties Length: 492aa    MW: 56035.1 Da    PI: 5.1172
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn171621genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3370.33.2e-113243391353
                 XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 
                 +elkkr wkd+++l++lk +++     ke++++ak     +e +r+kkmsr+QD+iLkYM k+me c aqGfvYgi+pe gkpv+g+sdsLr+WWk kv
  Achn171621  24 DELKKRIWKDRVRLQKLKAKHEA----KEPEAEAK-----QELSRKKKMSRSQDAILKYMAKIMEECSAQGFVYGIVPERGKPVTGSSDSLREWWKGKV 113
                 79*************77776664....88866665.....7********************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS
        EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198
                 +fd+ +p+a+++      +l++++    +++s  h l++l DTtlgSLLsalmqhc+ppqrrfplekg++pPWW tG+e wwg +g++++qg+ppy+kp
  Achn171621 114 KFDQVAPVAVAEF---LRVLEQGEF---DPTSCMHFLQDLRDTTLGSLLSALMQHCMPPQRRFPLEKGLAPPWWSTGNEIWWGDQGIAEEQGPPPYRKP 206
                 ***********98...346665554...589******************************************************************** PP

                 GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX CS
        EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqa 297
                 hdlkkawkvsvL+  ikhmsp++e++r+l+rqsk+lq+km+a e+ ++++v+nqe +++          +  ++k+++s ++++   g+ke +     +
  Achn171621 207 HDLKKAWKVSVLAGIIKHMSPNLERMRRLVRQSKCLQHKMTATETSTWCKVVNQEAALL----------KLTEKKLKISPSKDD---GEKEGE-----E 287
                 *******************************************************8765..........347889999999764...333333.....1 PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
        EIN3 298 vkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                 v    ++++   ++k   e++ +  + +   cq+ ++++se  l+f dkns+ +++
  Achn171621 288 VA--INLNCSGDKRKCVFEREVT-VN-ALFSCQNLECPQSELDLGFVDKNSRAEHK 339
                 11..2455555554344444444.34.3699*********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048735.3E-10924261No hitNo description
Gene3DG3DSA:1.10.3180.102.5E-65138268IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.62E-57141264IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MIELCEELND PPSSDDEDDK LGYDELKKRI WKDRVRLQKL KAKHEAKEPE AEAKQELSRK  60
KKMSRSQDAI LKYMAKIMEE CSAQGFVYGI VPERGKPVTG SSDSLREWWK GKVKFDQVAP  120
VAVAEFLRVL EQGEFDPTSC MHFLQDLRDT TLGSLLSALM QHCMPPQRRF PLEKGLAPPW  180
WSTGNEIWWG DQGIAEEQGP PPYRKPHDLK KAWKVSVLAG IIKHMSPNLE RMRRLVRQSK  240
CLQHKMTATE TSTWCKVVNQ EAALLKLTEK KLKISPSKDD GEKEGEEVAI NLNCSGDKRK  300
CVFEREVTVN ALFSCQNLEC PQSELDLGFV DKNSRAEHKS QCSYRNNETQ ISGKGPSFKD  360
FDSVDCQQSE LGLGSVDKNV RTEHESKCSY HGDETQVDRK SLNFKDPDSI DWAQEMGNEN  420
YGAHRNDVEE GSCGSREDFE NYWGENVIQQ IPLDVVMGIQ RGNTDLTMNP ILEELLNEEG  480
ETSIWDLGYH Q*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-571392661128Protein ETHYLENE INSENSITIVE 3
4zds_B2e-571392661128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017619654.11e-168PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
RefseqXP_017972414.11e-168PREDICTED: LOW QUALITY PROTEIN: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-129EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2R6R6880.0A0A2R6R688_ACTCH; ETHYLENE INSENSITIVE 3-like 4 protein
STRINGGorai.003G043500.11e-165(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-124EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]