PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn171621 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | EIL | ||||||||
Protein Properties | Length: 492aa MW: 56035.1 Da PI: 5.1172 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 370.3 | 3.2e-113 | 24 | 339 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 +elkkr wkd+++l++lk +++ ke++++ak +e +r+kkmsr+QD+iLkYM k+me c aqGfvYgi+pe gkpv+g+sdsLr+WWk kv Achn171621 24 DELKKRIWKDRVRLQKLKAKHEA----KEPEAEAK-----QELSRKKKMSRSQDAILKYMAKIMEECSAQGFVYGIVPERGKPVTGSSDSLREWWKGKV 113 79*************77776664....88866665.....7********************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198 +fd+ +p+a+++ +l++++ +++s h l++l DTtlgSLLsalmqhc+ppqrrfplekg++pPWW tG+e wwg +g++++qg+ppy+kp Achn171621 114 KFDQVAPVAVAEF---LRVLEQGEF---DPTSCMHFLQDLRDTTLGSLLSALMQHCMPPQRRFPLEKGLAPPWWSTGNEIWWGDQGIAEEQGPPPYRKP 206 ***********98...346665554...589******************************************************************** PP GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX CS EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqa 297 hdlkkawkvsvL+ ikhmsp++e++r+l+rqsk+lq+km+a e+ ++++v+nqe +++ + ++k+++s ++++ g+ke + + Achn171621 207 HDLKKAWKVSVLAGIIKHMSPNLERMRRLVRQSKCLQHKMTATETSTWCKVVNQEAALL----------KLTEKKLKISPSKDD---GEKEGE-----E 287 *******************************************************8765..........347889999999764...333333.....1 PP XXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 298 vkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 v ++++ ++k e++ + + + cq+ ++++se l+f dkns+ +++ Achn171621 288 VA--INLNCSGDKRKCVFEREVT-VN-ALFSCQNLECPQSELDLGFVDKNSRAEHK 339 11..2455555554344444444.34.3699*********************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 5.3E-109 | 24 | 261 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.5E-65 | 138 | 268 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.62E-57 | 141 | 264 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0080167 | Biological Process | response to karrikin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence Send to blast |
MIELCEELND PPSSDDEDDK LGYDELKKRI WKDRVRLQKL KAKHEAKEPE AEAKQELSRK 60 KKMSRSQDAI LKYMAKIMEE CSAQGFVYGI VPERGKPVTG SSDSLREWWK GKVKFDQVAP 120 VAVAEFLRVL EQGEFDPTSC MHFLQDLRDT TLGSLLSALM QHCMPPQRRF PLEKGLAPPW 180 WSTGNEIWWG DQGIAEEQGP PPYRKPHDLK KAWKVSVLAG IIKHMSPNLE RMRRLVRQSK 240 CLQHKMTATE TSTWCKVVNQ EAALLKLTEK KLKISPSKDD GEKEGEEVAI NLNCSGDKRK 300 CVFEREVTVN ALFSCQNLEC PQSELDLGFV DKNSRAEHKS QCSYRNNETQ ISGKGPSFKD 360 FDSVDCQQSE LGLGSVDKNV RTEHESKCSY HGDETQVDRK SLNFKDPDSI DWAQEMGNEN 420 YGAHRNDVEE GSCGSREDFE NYWGENVIQQ IPLDVVMGIQ RGNTDLTMNP ILEELLNEEG 480 ETSIWDLGYH Q* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-57 | 139 | 266 | 1 | 128 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-57 | 139 | 266 | 1 | 128 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017619654.1 | 1e-168 | PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
Refseq | XP_017972414.1 | 1e-168 | PREDICTED: LOW QUALITY PROTEIN: putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
Swissprot | Q9LX16 | 1e-129 | EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
TrEMBL | A0A2R6R688 | 0.0 | A0A2R6R688_ACTCH; ETHYLENE INSENSITIVE 3-like 4 protein | ||||
STRING | Gorai.003G043500.1 | 1e-165 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10120.1 | 1e-124 | EIL family protein |
Publications ? help Back to Top | |||
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