PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn170521
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 245aa    MW: 27960.3 Da    PI: 8.2285
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn170521genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-10120157946
                 CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                 r+++NReAAr+sR+RKka++++Le    +L +  ++L+
  Achn170521 120 RLAQNREAARKSRLRKKAYVQQLEHSRMKLIQLEQELQ 157
                 99**********************87777766665554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF059703.1E-365109IPR010285DNA helicase Pif1-like
SuperFamilySSF525403.98E-548111IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM003380.0059115177IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.0E-7120173No hitNo description
SuperFamilySSF579594.94E-7120163No hitNo description
PROSITE patternPS000360120134IPR004827Basic-leucine zipper domain
PfamPF001704.4E-7120173IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000723Biological Processtelomere maintenance
GO:0006281Biological ProcessDNA repair
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003678Molecular FunctionDNA helicase activity
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MPFGKQSLQA ELFRDTKLII WDEVPMQHRY CVETVDRTLK DICDNINPFR GIVVVLGGDF  60
RQVLPVIPKG VREQIMAASL RRSVLWHDIH VLTLHVNMRL NNTDIENINF AKFCMEAFCR  120
LAQNREAARK SRLRKKAYVQ QLEHSRMKLI QLEQELQRAR QQILGNQLEP LKDQQLMGIC  180
NPQQSSQQAE DALSQGVEAL QQSLVDTLSS NFLGHTGSGN VSDYMEQMAI AMGKLATLEN  240
FLIR*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the determination of floral organ number. Acts to determine floral organ patterning by establishing floral organ primordia in specific numbers and positions. Plays a role in regulating stem cell fate by directly controlling AG expression. Binds to the 5'-AAGAAT-3' cis-acting element found in AG promoter. Might represent a target for a post-translational modification by GRXC7/ROXY1. {ECO:0000269|PubMed:19395638, ECO:0000269|PubMed:19395639, ECO:0000269|PubMed:9990857}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028065846.14e-55uncharacterized protein LOC114268810
SwissprotQ9SX272e-30PAN_ARATH; Transcription factor PERIANTHIA
TrEMBLA0A3Q8TD587e-68A0A3Q8TD58_ACTDE; Basic leucine zipper protein 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1645924
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.12e-31bZIP family protein
Publications ? help Back to Top
  1. Maier AT,Stehling-Sun S,Offenburger SL,Lohmann JU
    The bZIP Transcription Factor PERIANTHIA: A Multifunctional Hub for Meristem Control.
    Front Plant Sci, 2011. 2: p. 79
    [PMID:22645551]
  2. Chandler JW,Werr W
    Arabidopsis floral phytomer development: auxin response relative to biphasic modes of organ initiation.
    J. Exp. Bot., 2014. 65(12): p. 3097-110
    [PMID:24744428]
  3. Wynn AN,Seaman AA,Jones AL,Franks RG
    Novel functional roles for PERIANTHIA and SEUSS during floral organ identity specification, floral meristem termination, and gynoecial development.
    Front Plant Sci, 2014. 5: p. 130
    [PMID:24778638]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. de Luis Balaguer MA, et al.
    Predicting gene regulatory networks by combining spatial and temporal gene expression data in Arabidopsis root stem cells.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(36): p. E7632-E7640
    [PMID:28827319]