PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn159561 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 329aa MW: 36817.8 Da PI: 7.5841 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.6 | 1.1e-08 | 57 | 123 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC.....................TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkas..................kapskKlsKaeiLekAveYIksL 54 rE+ RRdr+N+ f eL l + ++ +K++Ka+iL+ +++ +k+L Achn159561 57 ADREKLRRDRLNEQFLELGNALVFLGlvkssgshfqritllnstDPDRPKNDKATILTDTIQVLKDL 123 679*****************99996669***************8888899**************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.976 | 51 | 123 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.66E-5 | 52 | 127 | No hit | No description |
SuperFamily | SSF47459 | 5.5E-11 | 52 | 144 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.6E-10 | 54 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.5E-6 | 56 | 123 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.6E-7 | 57 | 129 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence Send to blast |
MGMEIVKLHP ALKEKQCIRA NASHGVPIDG EELSLMGKQK HEVEVKDPIA ARKFQKADRE 60 KLRRDRLNEQ FLELGNALVF LGLVKSSGSH FQRITLLNST DPDRPKNDKA TILTDTIQVL 120 KDLTAEVNRL KAECTVLSEE SHELTQEKNE LREEKTSLKS DIDNLNLQYH QRVRDVFPWA 180 AIDSSFVMAP PRYPYPVHLP VPTGPIPMLP ALQPLPFFGN HNPGAIPNTC STYIPYPAPA 240 SHLSDQQSHQ CASTSCIPSK SDPQSKKLDR CRGSNNDKTD ESNDVVTDLE LKMPGSTAQQ 300 VGILNRYRVT QSGDIDLVTF FALRRSYR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021274838.1 | 1e-114 | transcription factor bHLH121 isoform X3 | ||||
Swissprot | Q9LT23 | 5e-70 | BH121_ARATH; Transcription factor bHLH121 | ||||
TrEMBL | A0A2R6RIT0 | 1e-160 | A0A2R6RIT0_ACTCH; Transcription factor bHLH121 like | ||||
STRING | EOX90849 | 1e-112 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5456 | 24 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 1e-72 | bHLH family protein |
Publications ? help Back to Top | |||
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