PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn157501 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 275aa MW: 30982.4 Da PI: 6.7888 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.5 | 5.7e-14 | 86 | 137 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+riN+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+ Achn157501 86 QRMTHIVVERNRRKRINHYLAVLRSLMPPS---YAQRGDQASIVGGAINFVKELE 137 79****************************...*******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 7.79E-14 | 84 | 141 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 3.8E-14 | 84 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.618 | 85 | 136 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.13E-16 | 85 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.9E-11 | 86 | 137 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.9E-9 | 91 | 142 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence Send to blast |
MALEAVVLQQ DPFTKDLYPI GDTTVGGSNS YGLGFEEVHL FCGYCTSDGE DAGGFPQEGS 60 PVLAQGPRKR KRRTRGMKNK EEMERQRMTH IVVERNRRKR INHYLAVLRS LMPPSYAQRG 120 DQASIVGGAI NFVKELEQRV QCLEAHKQLD SPLFANFFTF PQYSTWSTWH DDPVMTGCDS 180 EAAIEVNMVE THANIKIVSR RQPKQVSKMV VWFHSRGLTI LHLMVTTVEP MVLYSFSVKV 240 EDDCQLSTVN EIATTVHEMM SKIQVESSEI PIAI* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 67 | 72 | RKRKRR |
2 | 86 | 97 | RMTHIVVERNRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010652690.1 | 5e-91 | PREDICTED: transcription factor bHLH94 | ||||
Swissprot | Q9C7T4 | 1e-64 | BH096_ARATH; Transcription factor bHLH96 | ||||
TrEMBL | A0A2R6RDB2 | 0.0 | A0A2R6RDB2_ACTCH; Transcription factor bHLH96 like | ||||
STRING | VIT_07s0191g00240.t01 | 2e-90 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1996 | 24 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 5e-67 | bHLH family protein |
Publications ? help Back to Top | |||
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