 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Achn156971 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
|
| Family |
TCP |
| Protein Properties |
Length: 263aa MW: 29088.7 Da PI: 6.7725 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Achn156971 | genome | IKGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 107.2 | 2.5e-33 | 80 | 155 | 2 | 77 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaes 77
+g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG d++s++i+WL+++ak a+++l ++ +++ + e
Achn156971 80 TGRKDRHSKVCTARGPRDRRVRLSANTAIQFYDVQDRLGCDRPSEAIDWLMKEAKSAMDALDQSADQNPDQIldE--P 155
689*************************************************************44444333222..2 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MCSKLDLSRN HHHQSDEEDQ NQPSPSQNLP LPVKHTLSVP SFVPKKLSVA RVRERAQKIR 60
ERTRGEIVEV QGGRILRSIT GRKDRHSKVC TARGPRDRRV RLSANTAIQF YDVQDRLGCD 120
RPSEAIDWLM KEAKSAMDAL DQSADQNPDQ ILDEPHQIGI SNSGYFGEEP MNSQEQLFSQ 180
GGTLQSSYSP AFRALMSPQI SNLNCETILP QVISPCLDTG NLCPSDGFSQ VFVSRGIQGS 240
PGLAELELPC KFLTVEGSKA FD*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT1G53230.1 | 5e-39 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 |
