PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn137931 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 120aa MW: 13819.9 Da PI: 5.1049 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.8 | 1e-10 | 62 | 102 | 1 | 42 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv 42 +p G+rF Ptd+elv +yL kkv k+l++ ++i+e+d +++ Achn137931 62 MPSGYRFVPTDQELVFHYLIKKVCCKPLPA-QFISEMDAISF 102 699************************999.77888875433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-11 | 60 | 112 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 12.935 | 62 | 119 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.7E-5 | 63 | 87 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence Send to blast |
MPSGYRFVLT DQETKQGIDQ VMPSWYRFEP TDQETKQGID QVMPSGYRFV PTDQETKQGI 60 VMPSGYRFVP TDQELVFHYL IKKVCCKPLP AQFISEMDAI SFYSQPPMIL ADLRNLMTR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6PRT9 | 2e-72 | A0A2R6PRT9_ACTCH; NAC transcription factor |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-10 | NAC domain containing protein 83 |