PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn126311
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 78aa    MW: 8845.23 Da    PI: 6.0729
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn126311genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.41.3e-142167148
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                lppG+rF Ptd elvv+yL +kv++k+l+  ++i  ++iy+++P++L 
  Achn126311 21 LPPGYRFVPTDTELVVHYLFNKVSHKPLPG-NMIIAINIYDFHPQQLA 67
                79***************************9.8899************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.76E-171970IPR003441NAC domain
PROSITE profilePS5100516.1942177IPR003441NAC domain
PfamPF023653.3E-72264IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    Send to blast
MDKGKSIIIE VEGDDERKID LPPGYRFVPT DTELVVHYLF NKVSHKPLPG NMIIAINIYD  60
FHPQQLAHLL VNFDLSK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PHF53e-41A0A2R6PHF5_ACTCH; NAC transcription factor
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.18e-13NAC-like, activated by AP3/PI