PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn126301 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 222aa MW: 24981.1 Da PI: 6.2303 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 30.4 | 1.1e-09 | 3 | 42 | 88 | 128 |
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++k+v+ +++ vg k +L fy+g ++g+kt+W mhey++ Achn126301 3 SEKPVMY-ENNIVGYKMSLDFYEGGPRDGRKTEWKMHEYKI 42 5789999.8899***************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.652 | 1 | 67 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.35E-14 | 3 | 66 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MTSEKPVMYE NNIVGYKMSL DFYEGGPRDG RKTEWKMHEY KILPTRKSNA TDSMKLDDLV 60 LCKIYSTSKK AKDVPENQRT ELAAKNANQD SRPLGISNGM NMDGHHMPLV WPSMSFQELS 120 RVQIQNPSML SRGDNNQLYD LTYLDGLING SSHDNCPSSL GAHMMHTEER STPNLLPHNS 180 ERHRIMLEPV DDHTSTLTNL SISYPEFSGD QISNLSLLSS C* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 2e-11 | NAC-like, activated by AP3/PI |