PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn125861 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 336aa MW: 37025.7 Da PI: 4.8783 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 39.7 | 1.5e-12 | 6 | 80 | 2 | 74 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrk 74 p+Gf+F+Ptd++l+++yL +k+ gk+l++e +i e d+y+ + L + ++++++ yfF++ +kk+a+ r+ Achn125861 6 PAGFKFRPTDQQLIHDYLFNKIVGKELPFEGIILERDVYEEQV--LSEifrsWNESGDTRSYFFTRLKKKAANYCRT 80 89***************************999******98754..4322233445578899*******999875544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.01E-11 | 4 | 83 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 10.378 | 5 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.3E-7 | 6 | 76 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence Send to blast |
MEKVIPAGFK FRPTDQQLIH DYLFNKIVGK ELPFEGIILE RDVYEEQVLS EIFRSWNESG 60 DTRSYFFTRL KKKAANYCRT VGNGTESKDY VICMLQKSRG GKHGKEDTMQ SNRNGDEALT 120 NIPRGCFNNK RFKPIALQNQ NMENDASAMP PSGNSSYAVI KSASIVGEHV GFIHGEASVK 180 PLEQIMRDLL APDSSMENVA NVVVADTLAT LLPSGHYDVP DSILPFDSMP PLMQAKPAPI 240 VDEKGGYSSG ANEVRMQPSI ADQSLHSSNA EFAVLDYLRF STIYAEFATL ASAPEVTAAE 300 NDVGNLVQPS IADQSLLSSN PEYVWMNSQM QNKPN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6PEF3 | 0.0 | A0A2R6PEF3_ACTCH; NAC domain-containing protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.2 | 8e-08 | NAC domain containing protein 50 |