PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn125861
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 336aa    MW: 37025.7 Da    PI: 4.8783
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn125861genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.71.5e-12680274
         NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrk 74
                p+Gf+F+Ptd++l+++yL +k+ gk+l++e +i e d+y+ +   L +      ++++++ yfF++ +kk+a+  r+
  Achn125861  6 PAGFKFRPTDQQLIHDYLFNKIVGKELPFEGIILERDVYEEQV--LSEifrsWNESGDTRSYFFTRLKKKAANYCRT 80
                89***************************999******98754..4322233445578899*******999875544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-11483IPR003441NAC domain
PROSITE profilePS5100510.3785165IPR003441NAC domain
PfamPF023657.3E-7676IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MEKVIPAGFK FRPTDQQLIH DYLFNKIVGK ELPFEGIILE RDVYEEQVLS EIFRSWNESG  60
DTRSYFFTRL KKKAANYCRT VGNGTESKDY VICMLQKSRG GKHGKEDTMQ SNRNGDEALT  120
NIPRGCFNNK RFKPIALQNQ NMENDASAMP PSGNSSYAVI KSASIVGEHV GFIHGEASVK  180
PLEQIMRDLL APDSSMENVA NVVVADTLAT LLPSGHYDVP DSILPFDSMP PLMQAKPAPI  240
VDEKGGYSSG ANEVRMQPSI ADQSLHSSNA EFAVLDYLRF STIYAEFATL ASAPEVTAAE  300
NDVGNLVQPS IADQSLLSSN PEYVWMNSQM QNKPN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PEF30.0A0A2R6PEF3_ACTCH; NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.28e-08NAC domain containing protein 50