PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn124381 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 167aa MW: 19406 Da PI: 7.3207 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 47 | 8.4e-15 | 3 | 61 | 69 | 128 |
NAM 69 atgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g r++r ++ yWk+t +k+++ +++ vg k +L fy+g +++g++t+W mheyr+ Achn124381 3 TNGVRPKRENSDEYWKQTIPNKHIMY-ENKIVGYKMSLDFYEGGHRDGRRTEWKMHEYRI 61 5799****999***************.9999***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 18.786 | 1 | 82 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.57E-15 | 3 | 67 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.8E-6 | 8 | 61 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MFTNGVRPKR ENSDEYWKQT IPNKHIMYEN KIVGYKMSLD FYEGGHRDGR RTEWKMHEYR 60 IHKNSPPPPP KNSNVADSMK KSPIYIYTQT HIYIYIDIDI IDTEEENLEE EEEERISSLI 120 QKCPKHAKHT NLPQIHARLL TLSLPTCISL TKIVSSSALT PHGNID* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.1 | 1e-11 | NAC domain containing protein 1 |