PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn123881
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Trihelix
Protein Properties Length: 414aa    MW: 47290.1 Da    PI: 5.7816
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn123881genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix66.45.9e-2181168176
    trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sess 76 
                 +Wt++ v++Li+++ +++++   +            +kk++W+ vsk+m ++g+ +sp+qC++k+++lnkrykk++++ +++t ++++
  Achn123881  81 KWTDNVVRLLIAVVASVGDDGTLDGvegmkrksgvmQKKGKWKTVSKVMISKGCYVSPQQCEDKFNDLNKRYKKLNDILGRGTsCRVV 168
                 7**************888888854334455666778*********************************************9625554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.9E-1979204No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MVGCENDHPI GLVGAKGTAQ KGFPMNFGKR KAVASVEVGN SNHTNSSEED ELSYDEDVNC  60
EDVIGVTRAK GKKESPWQRM KWTDNVVRLL IAVVASVGDD GTLDGVEGMK RKSGVMQKKG  120
KWKTVSKVMI SKGCYVSPQQ CEDKFNDLNK RYKKLNDILG RGTSCRVVED PFLMESMPHL  180
SAKLKKDVRK ILSSKHLFYK EMCAYHNGKR IPNCDDIDLQ AHSLPLSRCS KDNNGSEEEE  240
TDENGESDDD ESDNEDNNNT GGNLERMEEH GEQKKQDEDD GSFWFQSSVL GRLKAEMAEI  300
FQDPTRSLWE QREWITGRRL QLQEQRIGIQ AEAFELEKRC FKWLRFCSKK ETELERSRHE  360
NERMMLENER MVLQLKQKEL EIALKRPDAS LEAGSLNVSR WQGKDQVDLS RRQ*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028062123.10.0uncharacterized protein LOC114265508
TrEMBLA0A2R6P8900.0A0A2R6P890_ACTCH; Trihelix transcription factor GT-4 like
STRINGXP_010102326.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA129131720
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76870.12e-64