PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn117011
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family C2H2
Protein Properties Length: 423aa    MW: 46357.4 Da    PI: 9.9024
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn117011genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00013193215223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +Cp Cg+ F   +nL+ H+ + H
  Achn117011 193 PCPQCGEIFMKAENLELHQAVrH 215
                 7******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280192215IPR007087Zinc finger, C2H2
PROSITE profilePS501578.829192220IPR007087Zinc finger, C2H2
SuperFamilySSF563991.53E-18217421No hitNo description
Gene3DG3DSA:3.90.228.104.4E-10218420IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MAKTKSPKKN TKKPTKNQNQ NPPKPEKPPS WEVLRSLLTC KHLQAQLQPP QKQQKHNEMQ  60
KPEQPTEENI KKCKKMTCSG SLCSNTKVMH RPEQSLSTPE DKKKRASMGT ASINNNGSNS  120
SRSLKAPLNE AIVSSSASTS NSSMLLSFGS SSNAGSFRGM PFRRFSGCYE CRMVVDPVLG  180
FSRDPSLRAT ICPCPQCGEI FMKAENLELH QAVRHAVSEL GPEDTSKNIV EIIFQSSWLK  240
KQSPICKIDR ILKVLNTPKT IAKFEEYRDS VKAKSVKLPK KHPRCAADGN ELLRFHSSAV  300
ACSLGLDGSS NLCNSIPNCS VCRIIKNGFR VSAGGKGVLT TATSGRAHDK ADLAAEDRSD  360
RRAMLVCRVI AGRVRKGLEG CVEAAEYDSV ACAAGFYSNL DDLYVFHPMA ILPCFVVLYR  420
GF*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002284394.30.0PREDICTED: uncharacterized protein LOC100257501
TrEMBLA0A2R6Q1X80.0A0A2R6Q1X8_ACTCH; PR domain zinc finger protein
STRINGVIT_18s0001g03670.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107231517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.17e-96C2H2-like zinc finger protein