PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn092921 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 141aa MW: 16287.6 Da PI: 10.271 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.1 | 4.3e-10 | 63 | 115 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +++ h +Er+RR+++ L+++lP+ ++K s ++ + ++v+YI++Lq Achn092921 63 KKMIHRDIERQRRREMAVLHISLKSMLPPeY---IKGKRSMSDHVHETVNYIRDLQ 115 5788*************************77...*********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 5.76E-7 | 61 | 119 | No hit | No description |
SuperFamily | SSF47459 | 4.84E-12 | 61 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.659 | 62 | 114 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.3E-7 | 63 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.0E-8 | 64 | 132 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MIIPLRFLTG RLFDLINNEQ DSLLVTIPSL SNSGKPEDGG RPRKASLAFD ENIDENPSDH 60 KRKKMIHRDI ERQRRREMAV LHISLKSMLP PEYIKGKRSM SDHVHETVNY IRDLQKRVEE 120 LSEKRDGLKR LTNKSTANDN * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022156916.1 | 3e-34 | transcription factor bHLH126-like | ||||
Swissprot | Q9FLI0 | 3e-23 | BH120_ARATH; Transcription factor bHLH120 | ||||
TrEMBL | A0A2R6Q881 | 2e-81 | A0A2R6Q881_ACTCH; Transcription factor bHLH120 like | ||||
STRING | POPTR_0001s08380.1 | 5e-29 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA598 | 24 | 109 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 1e-25 | bHLH family protein |
Publications ? help Back to Top | |||
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