PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn089081
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 1241aa    MW: 140193 Da    PI: 5.927
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn089081genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.21e-292694111128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyW 83 
                 lp+G++F+P+d el+ e+L++k+   +    + ++e+i++vd    i++++P++Lp  +k++ ++++fF++  ++y+tg+rk+r          +  +W
  Achn089081 269 LPAGVKFDPSDVELL-EHLAAKCGVGNskphIFIDEFIPTVDreegICYTHPENLP-GAKTDGSSVHFFHRIINAYTTGQRKRRRihnedsmkKEGVRW 365
                 799************.999999876664566444445666655666**********.55678899*******************75777777444566* PP

         NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 ++tgk+k v++ +g ++g kk++v+y  +++ +k+ k++Wvmh+y+l
  Achn089081 366 HKTGKTKCVMA-NGLQKGYKKIMVLYrtSKKGSKPDKANWVMHQYHL 411
                 ***********.999***********5434667778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd139994.43E-761223No hitNo description
PROSITE profilePS5001133.461227IPR000719Protein kinase domain
SMARTSM002206.3E-293227IPR000719Protein kinase domain
SuperFamilySSF561124.99E-5525249IPR011009Protein kinase-like domain
PfamPF077142.3E-4025223IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
Gene3DG3DSA:3.30.200.205.9E-93474No hitNo description
Gene3DG3DSA:1.10.510.105.2E-3975223No hitNo description
PROSITE patternPS0010808395IPR008271Serine/threonine-protein kinase, active site
SuperFamilySSF1019411.44E-32259430IPR003441NAC domain
PROSITE profilePS5100528.221269430IPR003441NAC domain
PfamPF023654.2E-12270411IPR003441NAC domain
PROSITE profilePS5129518.071719816IPR001890RNA-binding, CRM domain
SuperFamilySSF754711.7E-19720814IPR001890RNA-binding, CRM domain
SMARTSM011032.6E-17721805IPR001890RNA-binding, CRM domain
PfamPF019851.3E-16721805IPR001890RNA-binding, CRM domain
Gene3DG3DSA:3.30.110.607.0E-15721814IPR001890RNA-binding, CRM domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0003723Molecular FunctionRNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1241 aa     Download sequence    Send to blast
MAKICHDKII LSLSQILEDI DIEKKFIGAC KEPVMVIVTE LLQGGTLRKY LLNMRPSCVD  60
IHVAIGFALD ITRAMECLHS HGIIHRDLKP ENLLLTADHK TIKLADFGLA REESLTEMMT  120
AETGTYRWMA PELYSTVTLR HGEKKHYNHK VDAYSFAIVL WELIHNKLPF QGMSNLQAAY  180
AAAFKNTRPS ADDLPVDLAL IVTSCWREDP NARPNFSQIT QMLLKYLSTI SPPEPTIPPG  240
IFTYKNAVLP PKSPGTSSLM HVLHEWPGLP AGVKFDPSDV ELLEHLAAKC GVGNSKPHIF  300
IDEFIPTVDR EEGICYTHPE NLPGAKTDGS SVHFFHRIIN AYTTGQRKRR RIHNEDSMKK  360
EGVRWHKTGK TKCVMANGLQ KGYKKIMVLY RTSKKGSKPD KANWVMHQYH LGTAEDEIEG  420
QFVVSKILYQ LQKQSDNTDS SHVMEDSDLG TIQTVPRTPK TNTPNPPRPR KSFWCDDVTD  480
DYLILPKSSA QEAEFITETS HPSISGPPYK EETETHTWLA GESQAVDGNG DDPLLCDEKL  540
NSYVDLDDLG LNDGPSNDFS RLTPDVPGVD RINPPCGIAN LENLELDAPL DFQLAFHIFV  600
VADSLNVLSS SDVPSKFTTS DVFQSSFQIK SLNLLDGSRE MSTGLGRSMR SKVERRMRKE  660
SGKTLREIRR AKDLRKKLMT DEERLIYNLR RAKKKVALLL QKLKKYELPE LPTPRHDPEL  720
LTPEQLQAYK KIGFRNKNYV PVGVRGVFGG VVQNMHLHWK FHETVQVCCD NFPKEKIKEM  780
ATMIARLSGG IVINIHNVKT IIMFRGRNYR QPKNLIPINT LTKRKALFKA RFEQALESQK  840
LNIKKIEQQL RRKGVNPDDP VALASIQRVA STFFNAIDKK AGSPYVFRED KQFEAIPSTN  900
LQQSEPADDS DQEELDRFIA EIEDAADKEW AAEEAAEKEE FGKIRYLNRE DFGGRFRSSE  960
LLNSEDSDTD IRGGERGLKD ARSGRRRTGD SDNEDEVGVM SDYESDADEH DQAPVKFGKP  1020
RLERGKQNGV VRAHGNEAFR RNAEAKFSEK TLKEDSESED MLSGVEDAMW QSDSEEEQDL  1080
GQASAITNNY KSSSGEEEDY LHVKRYKNGV GVANHFASNA NDFDEAPDQL NLSRVAREKQ  1140
NKNHKANNSD AFDRNAGGKF RGESTKEKYE SEDLFSDSET AMWESDVQED LDSETSRLGT  1200
SDYKSNSEDE DCVMKKDGKD EVNDNNMKSP KQVDEAWESD *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4uya_A5e-302822392287MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE MLK4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1346350RKRRR
2347351KRRRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028114759.10.0uncharacterized protein LOC114312677 isoform X1
TrEMBLA0A2R6P9B30.0A0A2R6P9B3_ACTCH; RNA-binding, CRM domain protein
STRINGVIT_14s0066g00360.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA812222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.13e-69NAC domain containing protein 85