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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn085011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bZIP | ||||||||
Protein Properties | Length: 216aa MW: 24552.7 Da PI: 10.0116 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.3 | 2.1e-10 | 19 | 63 | 2 | 46 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k l+ rr+++NReAAr+sR+RKka++++Le +L++ ++L+ Achn085011 19 KNLRTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQ 63 789999*************************98888887776554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-8 | 15 | 65 | No hit | No description |
SMART | SM00338 | 6.7E-7 | 18 | 81 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.4E-8 | 19 | 63 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.151 | 20 | 64 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.38E-7 | 22 | 65 | No hit | No description |
CDD | cd14708 | 9.00E-23 | 22 | 74 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 25 | 40 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 9.2E-31 | 105 | 177 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MADISPRTDT STDADTEDKN LRTLRRLAQN REAARKSRLR KKAYVQQLES SRMKLTQLEQ 60 ELQRARQQGI FISSSGDQSQ SLSGNGALAF DVEYARWLEE HNRRINELRG AVNSHAGDGE 120 LRSIVDGILA HYDEIFRIKG DAAKADVFHI LSGMWKTPAE RCFLWLGGFR SSEILKFTAH 180 LSSISSIKDR VRHHSLDFKD CQKRTPQLPS FFTMN* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KC008715 | 0.0 | KC008715.1 Camellia sinensis bZIP transcription factor family protein 5 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022885958.1 | 1e-117 | transcription factor TGA2.2-like isoform X2 | ||||
Swissprot | P23923 | 1e-100 | HBP1B_WHEAT; Transcription factor HBP-1b(c38) | ||||
TrEMBL | A0A2R6PFG1 | 1e-117 | A0A2R6PFG1_ACTCH; Transcription factor like | ||||
STRING | Migut.F00128.1.p | 1e-113 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21364 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 7e-76 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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