PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn085011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 216aa    MW: 24552.7 Da    PI: 10.0116
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn085011genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.1e-101963246
                XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                k l+  rr+++NReAAr+sR+RKka++++Le    +L++  ++L+
  Achn085011 19 KNLRTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQ 63
                789999*************************98888887776554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-81565No hitNo description
SMARTSM003386.7E-71881IPR004827Basic-leucine zipper domain
PfamPF001708.4E-81963IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.1512064IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-72265No hitNo description
CDDcd147089.00E-232274No hitNo description
PROSITE patternPS0003602540IPR004827Basic-leucine zipper domain
PfamPF141449.2E-31105177IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MADISPRTDT STDADTEDKN LRTLRRLAQN REAARKSRLR KKAYVQQLES SRMKLTQLEQ  60
ELQRARQQGI FISSSGDQSQ SLSGNGALAF DVEYARWLEE HNRRINELRG AVNSHAGDGE  120
LRSIVDGILA HYDEIFRIKG DAAKADVFHI LSGMWKTPAE RCFLWLGGFR SSEILKFTAH  180
LSSISSIKDR VRHHSLDFKD CQKRTPQLPS FFTMN*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC0087150.0KC008715.1 Camellia sinensis bZIP transcription factor family protein 5 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022885958.11e-117transcription factor TGA2.2-like isoform X2
SwissprotP239231e-100HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLA0A2R6PFG11e-117A0A2R6PFG1_ACTCH; Transcription factor like
STRINGMigut.F00128.1.p1e-113(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2136422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.27e-76TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Tabata T,Nakayama T,Mikami K,Iwabuchi M
    HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
    EMBO J., 1991. 10(6): p. 1459-67
    [PMID:2026143]