PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn080531 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 321aa MW: 36420.3 Da PI: 7.8068 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 134.6 | 6.6e-42 | 22 | 149 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkg 97 ppG+rF Ptd elvv+yL +kv++k+l+ ++i ++iy+++P++L k+ + ++ +wyfF++r++k+++g r+nr at++gyWkat +dk+v+ ++ Achn080531 22 PPGYRFVPTDTELVVHYLYNKVSHKPLPG-NMIIAINIYDFHPQQLALKYPSlGKIHWYFFTPRERKHPNGVRPNRaiATRDGYWKATTSDKPVMY-EN 118 9***************************9.8899************9555552556********************76699***************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg k tL fy+g ++g+kt+W mhey++ Achn080531 119 NIVGYKMTLDFYEGGPRDGKKTEWKMHEYKI 149 99***************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.48E-49 | 20 | 173 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 46.837 | 21 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.9E-24 | 22 | 149 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
MDKGKSIINE VEGDDERERD IPPGYRFVPT DTELVVHYLY NKVSHKPLPG NMIIAINIYD 60 FHPQQLALKY PSLGKIHWYF FTPRERKHPN GVRPNRAIAT RDGYWKATTS DKPVMYENNI 120 VGYKMTLDFY EGGPRDGKKT EWKMHEYKIL PTRKSNAADS MKLDDLVLCK IYPTSKKAKD 180 VQENKRTELA AENANQDSRP LGVSNGMNMG LSMRFPELSG VQIQNPSLLS GGDNDRLYDL 240 AYLNGLINGS SHNFPSSLGS HMMHTVSVFE LTNETLCKSQ KQSSPNLLPH NSEWHRFMLE 300 PADDHMSPLV DLSTSSFRVV * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-41 | 12 | 172 | 6 | 166 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 8e-49 | NAC-like, activated by AP3/PI |