PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn070651
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family C2H2
Protein Properties Length: 150aa    MW: 16588.6 Da    PI: 8.8582
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn070651genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00023454222
                EETTTTEEESSHHHHHHHHHH CS
     zf-C2H2  2 kCpdCgksFsrksnLkrHirt 22
                +C+ C++ F ++ ++ +H+r 
  Achn070651 34 PCNECNRFFQNQNEFIQHLRY 54
                6******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.0373364IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MSGKYIPHDP ELKEGYDSTS DLEEEVDPKS NFTPCNECNR FFQNQNEFIQ HLRYVGCQRE  60
RSKPQKDTGS KIKAQRGDVK PSVETGVQGL FMDPLELRLG PPGSLLERPS LDLTLAIGNS  120
SRGIQQQRVR RENGRGGKGK GVGPNGGRF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-