PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn049201
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 158aa    MW: 18038.1 Da    PI: 7.6103
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn049201genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.61.5e-143189563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                ++ +r+q+NRe+ArrsR RK++ +  L  +v++L++eN +   +++  ++++ ++++e+
  Achn049201 31 RKRKRMQSNRESARRSRMRKQKHVNDLMAEVAQLSKENNQILTRISITTQHYHNVEAEN 89
                6789*****************************************99999999988877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-202791IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.0362992IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-112977No hitNo description
PfamPF001703.7E-123188IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-123184No hitNo description
CDDcd147024.54E-173283No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MGSSSGNSSG STQLQNSSSE EDLQLVMMDQ RKRKRMQSNR ESARRSRMRK QKHVNDLMAE  60
VAQLSKENNQ ILTRISITTQ HYHNVEAENS VLRAQMGELS QRLQSLNDIL NCMNTGNSVF  120
EADQNIQINQ DSFMNNSWNW MYLNQPIMAS AADVFQY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13051RKRKRMQSNRESARRSRMRKQK
24350RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002306888.18e-70bZIP transcription factor 44
SwissprotC0Z2L58e-46BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2R6RMQ61e-110A0A2R6RMQ6_ACTCH; BZIP transcription factor
STRINGPOPTR_0005s25290.13e-69(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.14e-43basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]