PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn046371 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | Nin-like | ||||||||
Protein Properties | Length: 642aa MW: 72846.2 Da PI: 7.4146 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 32.4 | 1.8e-10 | 273 | 301 | 24 | 52 |
RWP-RK 24 eLgvclTvLKriCRqyGIkRWPhRkiksl 52 +L ++ ++ Kr CR+yGI+RWP R + ++ Achn046371 273 KLSLSISTFKRVCRKYGINRWPPRNVDKV 301 6888999******************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 9.761 | 231 | 321 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.3E-7 | 273 | 301 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 3.27E-17 | 337 | 430 | No hit | No description |
Gene3D | G3DSA:3.10.20.240 | 3.7E-16 | 345 | 425 | No hit | No description |
PROSITE profile | PS51745 | 23.309 | 345 | 428 | IPR000270 | PB1 domain |
SMART | SM00666 | 1.2E-11 | 345 | 428 | IPR000270 | PB1 domain |
Pfam | PF00564 | 4.4E-14 | 345 | 426 | IPR000270 | PB1 domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 642 aa Download sequence Send to blast |
MAVLLKQEKN DNKAHKKASV EMKRDLRLLL NIYKLPLALT WVSCGACKTL LPVEDLYMVR 60 KYYGENFGEL NSFSMGTCRL PLRNERGVVG RVLSSPNLLY CSDVTQLSVA EYPFAHFARQ 120 CRLRGCFAIN LRSNYTGNNV YVLQIFLPDI NKDEDPLTSL SKILETMKKK FKTFRLASGE 180 VLVSIIEFQN GEQHHCVQAL QVTGYLPSLE PSQNGGERIE ADSSDHQLND AEQCVIDVNH 240 PQELGTKMTS GREHKNTGVR IEILYEDILR YSKLSLSIST FKRVCRKYGI NRWPPRNVDK 300 VRPPASHVDH QEEVPQLNSN LPSNQASASI AHTQPHDTVM QNANTVNVKA KYGNDITIKF 360 QLSLSSGLVE LQQQVAKRLN LEAGSYHIKY KDEEDELILI ACYEDLQDCI RTCRSPGSNA 420 VVLHIDQISQ VNHTKSVTPV PYIDCFPASL RPYIRHVNNV AFDGNCGFRA IAGLMNIGED 480 DGWVQVRRDL LTELNLHVDD YKIMYGQQRI DELTHCLSWF DGFSEMDRWM TMPDMGHLIA 540 SRYNVVLYHL SNKQCLTFLP LRSLPIPAAS RREITIGFVN NNHFVEVFLF PGHPVPPVAG 600 LWMQYRSPCA QGWDTAYNLR IQHFRKLVDS NVATTDVISV D* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028071833.1 | 1e-113 | protein NLP3-like | ||||
TrEMBL | A0A2R6QMR0 | 0.0 | A0A2R6QMR0_ACTCH; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 5e-29 | Nin-like family protein |