PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn033091 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 95aa MW: 10671.2 Da PI: 10.9683 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.3 | 1.4e-08 | 53 | 86 | 2 | 41 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKa 41 + hn+ Er RR ++N ++ Lr+llP a + sK+ Achn033091 53 KLDHNAKERVRRMKLNASYLALRSLLPIA------RRSKV 86 678************************98......34444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 8.0E-8 | 46 | 86 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.4E-6 | 50 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.29E-5 | 51 | 88 | No hit | No description |
PROSITE profile | PS50888 | 9.007 | 51 | 94 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.1E-5 | 53 | 86 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence Send to blast |
MSSAIGQPSE GKESDGDTLS PKTRERHRRI KYLQTEKMAV QHSAEEGSNA KKKLDHNAKE 60 RVRRMKLNAS YLALRSLLPI ARRSKVEISP PNIF* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019078981.1 | 3e-19 | PREDICTED: uncharacterized protein LOC100258265 isoform X1 | ||||
Refseq | XP_019078982.1 | 3e-19 | PREDICTED: transcription factor bHLH100 isoform X2 | ||||
TrEMBL | A0A2R6RGL8 | 1e-52 | A0A2R6RGL8_ACTCH; Transcription factor bHLH100 like | ||||
STRING | VIT_12s0034g02150.t01 | 7e-18 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15451 | 6 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71200.1 | 1e-09 | bHLH family protein |