PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn029231 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 270aa MW: 30625.7 Da PI: 8.4397 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 130.1 | 1.7e-40 | 2 | 113 | 17 | 128 |
NAM 17 eyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrap 114 +yL+++++++++++ +i+e+d+yk++PwdLp + +ekewyfFs++d+ky++g+r+nra+ sgyWkatg dk+++ + + + vg+kk Lvfy g+ap Achn029231 2 HYLCRRCTSQRISV-PIIAELDLYKYDPWDLPGLALYGEKEWYFFSPSDRKYPNGSRPNRAAGSGYWKATGADKPIKPTgHPKPVGIKKALVFYAGKAP 99 8*************.88***************6555679*************************************99766678*************** PP NAM 115 kgektdWvmheyrl 128 +gekt+W+mheyrl Achn029231 100 RGEKTNWIMHEYRL 113 ************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.01E-50 | 1 | 140 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 49.538 | 1 | 140 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.0E-17 | 2 | 113 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence Send to blast |
MHYLCRRCTS QRISVPIIAE LDLYKYDPWD LPGLALYGEK EWYFFSPSDR KYPNGSRPNR 60 AAGSGYWKAT GADKPIKPTG HPKPVGIKKA LVFYAGKAPR GEKTNWIMHE YRLADVDRSA 120 RNKSHSLRLD DWVLCRIYNK KGTLQKRNVV AAKPPESLEQ KPEIPTTHGL APPPSISPAS 180 GVYHDLVYFD TSDSVPRPHT DSSCSEHVLS PEITCDREVQ SEPTDWWRNA LDFPFHYVDA 240 TVDSALASQF QIHPMSPSQD MFMYVQKPF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-69 | 2 | 146 | 31 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028087763.1 | 1e-145 | NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-124 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2R6Q166 | 0.0 | A0A2R6Q166_ACTCH; NAC domain-containing protein | ||||
STRING | XP_002520341.1 | 1e-138 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1239 | 24 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-127 | NAC family protein |