PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn025721
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 121aa    MW: 13792.4 Da    PI: 5.1215
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn025721genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1383.7e-121541063
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                +q+NRe+ArrsR RK+  +  L+  +  L++eN++   +l+  ++++ ++++e+
  Achn025721  1 MQSNRESARRSRMRKQTHLNDLTAQISRLKEENDQIHTNLSITSQHYLNVEAEN 54
                79***********************************99999999988887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-8156IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.921157IPR004827Basic-leucine zipper domain
PfamPF001703.6E-8146IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-10149No hitNo description
CDDcd147021.04E-16147No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-9371No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MQSNRESARR SRMRKQTHLN DLTAQISRLK EENDQIHTNL SITSQHYLNV EAENSVLRAQ  60
MGELSQRLDA LNDILNYLDA SKGVFGSGVF EAIPESYMND SWNSMYFNQP IMASADLFLY  120
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028090424.17e-56bZIP transcription factor 11-like
RefseqXP_028098109.17e-56bZIP transcription factor 11-like
SwissprotC0Z2L54e-36BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2R6R0466e-83A0A2R6R046_ACTCH; BZIP transcription factor
STRINGPOPTR_0005s25290.11e-46(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-38basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]