PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn022611 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 373aa MW: 42159 Da PI: 4.7661 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62.4 | 1.4e-19 | 6 | 142 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykveP.wdLpk........kvka..eekewyfFskrdkkyatgkrknratksgyWkatgk 88 G++F+Ptd+el+++yL +k+ gk+l++e +i e d+y+ + +++ e+++ yfF++ +kk+a+g+ r++ +g+W+++ + Achn022611 6 REGLKFRPTDQELINDYLFNKIIGKELPFEGIILERdDVYDQHVlSEI-FrswvkdenG--DvsEDTQSYFFTRLKKKTANGEMYCRKVVNGTWRSQYS 101 57************************9999986555499998852334.1355555431..13367799**************************8876 PP NAM 89 dkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + + ++ +g+k++L + ++ + ++ +W++ e++l Achn022611 102 -RVINADeyddESIPIGIKRSLEYI--DSGSVQHKNWIIMEFSL 142 .55554456557777**********..45555689*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.09E-16 | 5 | 144 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 21.145 | 5 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.2E-13 | 7 | 142 | IPR003441 | NAC domain |
Pfam | PF03124 | 3.8E-10 | 309 | 372 | IPR004342 | EXS, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence Send to blast |
MAKRLREGLK FRPTDQELIN DYLFNKIIGK ELPFEGIILE RDDVYDQHVL SEIFRSWVKD 60 ENGDVSEDTQ SYFFTRLKKK TANGEMYCRK VVNGTWRSQY SRVINADEYD DESIPIGIKR 120 SLEYIDSGSV QHKNWIIMEF SLAGISLEHP LSSVLKLVES HVLFILRIKE VVTMTKSNSE 180 YAVPVNNDYA FVGSIRVRSI PISHDYTGVQ LFKTLRTLLV DEQVGLIKGD AGVQTLEQIM 240 QYLLEPDSSM VDVEHVVATV TLATPLPSSG HYDVLDSTLP FDIMPPLMEA KPSPTVDEDG 300 GYPSGENECA RRWFDEGQTS HLVNLGKYAS AMLAAGAKVV YEKERNVGWL CVLVIMSSGA 360 TLYQLYWDFV KD* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6S1Y4 | 1e-167 | A0A2R6S1Y4_ACTCH; Phosphate transporter like |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 4e-10 | NAC domain containing protein 2 |