PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn022611
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 373aa    MW: 42159 Da    PI: 4.7661
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn022611genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.41.4e-1961422128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykveP.wdLpk........kvka..eekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                   G++F+Ptd+el+++yL +k+ gk+l++e +i e  d+y+ +  +++                e+++ yfF++ +kk+a+g+   r++ +g+W+++ +
  Achn022611   6 REGLKFRPTDQELINDYLFNKIIGKELPFEGIILERdDVYDQHVlSEI-FrswvkdenG--DvsEDTQSYFFTRLKKKTANGEMYCRKVVNGTWRSQYS 101
                 57************************9999986555499998852334.1355555431..13367799**************************8876 PP

         NAM  89 dkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  + + +     ++  +g+k++L +   ++ + ++ +W++ e++l
  Achn022611 102 -RVINADeyddESIPIGIKRSLEYI--DSGSVQHKNWIIMEFSL 142
                 .55554456557777**********..45555689*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-165144IPR003441NAC domain
PROSITE profilePS5100521.1455169IPR003441NAC domain
PfamPF023655.2E-137142IPR003441NAC domain
PfamPF031243.8E-10309372IPR004342EXS, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MAKRLREGLK FRPTDQELIN DYLFNKIIGK ELPFEGIILE RDDVYDQHVL SEIFRSWVKD  60
ENGDVSEDTQ SYFFTRLKKK TANGEMYCRK VVNGTWRSQY SRVINADEYD DESIPIGIKR  120
SLEYIDSGSV QHKNWIIMEF SLAGISLEHP LSSVLKLVES HVLFILRIKE VVTMTKSNSE  180
YAVPVNNDYA FVGSIRVRSI PISHDYTGVQ LFKTLRTLLV DEQVGLIKGD AGVQTLEQIM  240
QYLLEPDSSM VDVEHVVATV TLATPLPSSG HYDVLDSTLP FDIMPPLMEA KPSPTVDEDG  300
GYPSGENECA RRWFDEGQTS HLVNLGKYAS AMLAAGAKVV YEKERNVGWL CVLVIMSSGA  360
TLYQLYWDFV KD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6S1Y41e-167A0A2R6S1Y4_ACTCH; Phosphate transporter like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.14e-10NAC domain containing protein 2