PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn022601 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 204aa MW: 22655.3 Da PI: 5.7554 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.1 | 2.9e-09 | 6 | 47 | 2 | 43 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykve 43 p+Gf F+Ptd+e +++yL kk g++l+l+ vi+++d+y+ e Achn022601 6 PVGFLFRPTDKEFIKHYLLKKQIGEELPLNGVIQKLDVYSEE 47 89***************************999******9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.81E-10 | 3 | 101 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-4 | 6 | 61 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
MAITFPVGFL FRPTDKEFIK HYLLKKQIGE ELPLNGVIQK LDVYSEEVLS KSSDYVVCLL 60 EKKERVIKQK NMQSKKNAGG ALVNLTSGVD MWINKRMRLC EEKNQRIEQL LMKCTIEAST 120 TTFPHGLIVM NVHENEVVMN TLAMPSPVYA LPVTVIESAP IAQQVTPIYG ESGFESMVNA 180 ENVVATDTLA TLQPSASYNL SES* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6S222 | 1e-148 | A0A2R6S222_ACTCH; NAC transcription factor 47 like |