PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn018171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | EIL | ||||||||
Protein Properties | Length: 638aa MW: 71628.4 Da PI: 5.788 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 418.5 | 7.3e-128 | 35 | 373 | 1 | 312 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 e+l++rmwkd+++lkr+ker+k ++ a++++k +ks + arrkkmsraQDgiLkYMlk mevcn++GfvYgiipekgkpv+gasd++raWWkekv Achn018171 35 EDLERRMWKDRIKLKRIKEREKLA---AQLAAEKEKPKKSMDLARRKKMSRAQDGILKYMLKLMEVCNVRGFVYGIIPEKGKPVSGASDNIRAWWKEKV 130 89*****************99963...3555999***************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198 +fd+ngpaai+ky+ ++++ ++e + ++ s+++ l++lqD+tlgSLLs+lm+hcdppqr++p ekg++pPWWPtG+e+ww++lgl+k q+ ppykkp Achn018171 131 KFDKNGPAAIAKYEVECAAEGHEGD-GLRKGSSQNILQDLQDATLGSLLSSLMKHCDPPQRKYPIEKGIPPPWWPTGSEEWWAKLGLPKGQS-PPYKKP 227 *************999988775555.57899*************************************************************.9***** PP GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XXXXXXXXXXXXXXXXXXXX... CS EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........slrkqspkvtlsceqkedve... 285 hdlkk+wkv+vLt vikhmsp+i++ir+l+ +sk+lqdkm++kes ++l vl+qee+++++ s+++ + +++k+++++++++dv+ Achn018171 228 HDLKKMWKVGVLTVVIKHMSPDIAKIRRLVQKSKCLQDKMTSKESLIWLGVLRQEESLVQSSSSDNGtsgiteapsGSLGGKKKLFVDSDSDYDVDgig 326 ***********************************************************99999944456777765333499**************665 PP ..XXXXXX.XXXXXXXXXX.......................XXXXXXXXXX CS EIN3 286 ..gkkeskikhvqavktta.......................gfpvvrkrkk 312 + + ++++++ + + + +rk+ Achn018171 327 dgV-----GSVSSKDRRIDqpvdvepssqprntkphslrhkeRRKEQPRRKR 373 541.....33333333333344455555666655553333332333333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 9.7E-122 | 35 | 283 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.0E-68 | 160 | 290 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 4.32E-59 | 164 | 286 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 638 aa Download sequence Send to blast |
MDANGLDDNS DIEVDEIRCG NIVERDVSDE EIEAEDLERR MWKDRIKLKR IKEREKLAAQ 60 LAAEKEKPKK SMDLARRKKM SRAQDGILKY MLKLMEVCNV RGFVYGIIPE KGKPVSGASD 120 NIRAWWKEKV KFDKNGPAAI AKYEVECAAE GHEGDGLRKG SSQNILQDLQ DATLGSLLSS 180 LMKHCDPPQR KYPIEKGIPP PWWPTGSEEW WAKLGLPKGQ SPPYKKPHDL KKMWKVGVLT 240 VVIKHMSPDI AKIRRLVQKS KCLQDKMTSK ESLIWLGVLR QEESLVQSSS SDNGTSGITE 300 APSGSLGGKK KLFVDSDSDY DVDGIGDGVG SVSSKDRRID QPVDVEPSSQ PRNTKPHSLR 360 HKERRKEQPR RKRPRVQSSP ADQQSAPSLY EHLHDEPGDN LLDINPTDVP SLIYTSQHEN 420 DTAATMRPVT MRPVEEDLQG QYQLPASEFG QISVFPTNEM PMQNVFVGEM PLPYPMVQNS 480 ELHHGSQDSR LHNENKDTKL FNGHISRSHQ VEGPQSCVLP RDPTYDFYNT SLGFGSGGDG 540 QQTQRAFNEP WVRPEDYGVN VPALHRNEND IFGGDMPQYL KNTFPNEEGR PVANFFGSPI 600 NSLSLDYHLG TDAIDSLDTA DVDSFLDEFN LMEYLGA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 3e-71 | 163 | 294 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU887512 | 0.0 | EU887512.1 Actinidia deliciosa EIN3-like protein EIL3 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028106972.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein isoform X1 | ||||
Swissprot | O23116 | 1e-170 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | B7T1N3 | 0.0 | B7T1N3_ACTDE; EIN3-like protein EIL3 | ||||
STRING | XP_006494725.1 | 0.0 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-143 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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