PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn017871 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | EIL | ||||||||
Protein Properties | Length: 627aa MW: 70813.8 Da PI: 6.1492 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 512.8 | 1.6e-156 | 52 | 429 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 +el++rmw+d+m+lkrlke++k ke + a+k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WWk+kv Achn017871 52 DELERRMWRDKMRLKRLKEMNKG----KEC-VAAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLREWWKNKV 145 79*******************98....677.88999*************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198 +fdrngpaai+kyqa+n i++++++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv pPWWPtG+e+ww++lg++ dqg+ppykkp Achn017871 146 RFDRNGPAAIAKYQADNSIPGKSEGSNL-VGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVHPPWWPTGNEEWWPQLGVQMDQGPPPYKKP 243 **********************999988.9********************************************************************* PP GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXXXXXXXXXXXXXXXXXX.XX CS EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.slrkqspkvtlsceqkedvegkkeskikh 294 hdlkkawkv+vLtavikh+sp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee+++++++++ ++ s++ +s ++++++ +++dveg +++ + Achn017871 244 HDLKKAWKVGVLTAVIKHISPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDrcPPmSSSGGSGSFVINDCSEYDVEGAEDEPNFD 342 *****************************************************************873347777****************777777699 PP XXXXXXXX..............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 295 vqavktta..............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 vq++k ++ +++++rkrk ++ e + +++++ ++tc+ q+++se +++f+d++s+++++ Achn017871 343 VQEQKPNNinllnmgfgrikdsflgqqlshpikdevitNLDFTRKRK-PTNELNNAMDHQ-IYTCDILQCPHSELRHGFHDRSSRDNHQ 429 ******99**************************************9.455555544554.6*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 9.4E-130 | 52 | 299 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.7E-75 | 174 | 309 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 3.53E-62 | 178 | 302 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 627 aa Download sequence Send to blast |
MSNRMMMFDE MGFCGDLDFL SAPLGDGDVT ASQTEPEAVV DDDYSDEEMG VDELERRMWR 60 DKMRLKRLKE MNKGKECVAA AKQRQSQEQA RRKKMSRAQD GILKYMLKMM EVCKAQGFVY 120 GIIPEKGKPV SGASDNLREW WKNKVRFDRN GPAAIAKYQA DNSIPGKSEG SNLVGPTPHT 180 LQELQDTTLG SLLSALMQHC DPPQRRFPLE KGVHPPWWPT GNEEWWPQLG VQMDQGPPPY 240 KKPHDLKKAW KVGVLTAVIK HISPDIAKIR KLVRQSKCLQ DKMTAKESAT WLAIINQEEA 300 LARELYPDRC PPMSSSGGSG SFVINDCSEY DVEGAEDEPN FDVQEQKPNN INLLNMGFGR 360 IKDSFLGQQL SHPIKDEVIT NLDFTRKRKP TNELNNAMDH QIYTCDILQC PHSELRHGFH 420 DRSSRDNHQL SCPYRINSSE FGLSNFHNNE VKSIVFSQPF VHPQPAAPSV NSIQHSFDLS 480 GLGVPEDGQK MISELMSVYD ANIQGNKQST PMNISGSSDR TLSQSLPQPN IQCQQDNNYI 540 HGRGFVMEGH IREEANLPVN LSTFSQHENR FDQRKVLSSQ FEANPNDSFP LMFGSPLYLP 600 SMDYPEHLPA VTRDSLSKPD ASIWFE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-81 | 177 | 308 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-81 | 177 | 308 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF319041 | 0.0 | KF319041.1 Actinidia chinensis EIN3-like protein EIL1 (EIL1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028078771.1 | 0.0 | protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A2R6QTV9 | 0.0 | A0A2R6QTV9_ACTCH; Protein ETHYLENE INSENSITIVE like | ||||
STRING | evm.model.supercontig_103.60 | 0.0 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |